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Report for CCDS7004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7004.1 Public Homo sapiens 9 DIPK1B 24 110 108 CCDS HistoryNCBI Gene:138311Re-query CCDS DB by CCDS ID:7004.1Re-query CCDS DB by GeneID:138311See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371692.9 ENSP00000360757.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371692.9Link to Ensembl Protein Viewer:ENSP00000360757.4Re-query CCDS DB by Nucleotide ID:ENST00000371692Re-query CCDS DB by Protein ID:ENSP00000360757
Original member Current member NCBI NM_152421.4 NP_689634.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152421.4Link to Protein Sequence:NP_689634.2Re-query CCDS DB by Nucleotide ID:NM_152421Re-query CCDS DB by Protein ID:NP_689634Link to BLAST:NP_689634.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689634.2 431 Q5VUD6-1 431 100% 0 0

Chromosomal Locations for CCDS 7004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136712666 136712728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136717577 136717711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136721921 136722028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136722125 136722301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136722962 136723774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGCGGCGGCTGCGGCGCCTGGCGCACCTGGTGCTCTTCTGCCCCTTCTCCAAGCGCCTGCAGGGCCGGC
TCCCAGGCCTCAGGGTCCGCTGCATCTTCCTGGCCTGGCTGGGCGTCTTTGCAGGCAGCTGGCTGGTGTA
CGTGCACTACTCGTCCTACTCGGAGCGCTGTCGCGGCCATGTCTGCCAGGTGGTCATTTGTGACCAGTAC
CGCAAGGGGATCATCTCGGGCTCCGTCTGCCAGGACCTGTGTGAGCTGCATATGGTGGAGTGGAGGACCT
GCCTCTCGGTGGCCCCGGGCCAGCAGGTGTACAGCGGGCTCTGGCGGGACAAGGATGTAACCATCAAGTG
TGGCATTGAGGAGACCCTCGACTCCAAGGCCCGGTCGGATGCGGCCCCCCGGCGGGAGCTGGTACTGTTT
GACAAGCCCACCCGGGGCACCTCCATCAAGGAATTCCGGGAGATGACCCTCAGCTTCCTCAAGGCGAACC
TGGGAGACCTGCCTTCCCTGCCGGCGCTGGTTGGCCAGGTCCTGCTCATGGCTGACTTCAACAAGGACAA
CCGGGTGTCCCTGGCGGAAGCCAAGTCCGTGTGGGCCCTGCTGCAGCGTAACGAGTTCCTGCTGCTGCTG
TCCCTGCAGGAGAAGGAGCACGCCTCCAGACTGCTGGGCTACTGTGGGGACCTCTACCTCACCGAGGGCG
TGCCGCATGGCGCCTGGCACGCGGCCGCCCTTCCACCCCTGTTGCGCCCACTGCTGCCGCCTGCCCTGCA
GGGTGCTCTCCAGCAGTGGCTGGGGCCTGCGTGGCCTTGGCGGGCCAAGATCGCCATCGGCCTGCTGGAG
TTCGTGGAGGAGCTCTTCCACGGCTCTTACGGGACTTTCTACATGTGTGAGACCACACTGGCCAACGTGG
GCTACACAGCCACCTACGACTTCAAGATGGCCGACCTGCAGCAGGTGGCACCCGAGGCCACCGTGCGCCG
CTTCCTGCAGGGCCGCCGCTGCGAGCACAGCACCGACTGCACCTACGGGCGCGACTGCAGGGCCCCGTGT
GACAGGCTCATGAGGCAGTGCAAGGGCGACCTCATCCAGCCCAACCTGGCCAAGGTGTGCGCACTGCTAC
GGGGCTACCTGCTGCCTGGCGCGCCCGCCGACCTCCGCGAGGAGCTGGGCACACAGCTGCGCACCTGTAC
CACGCTGAGCGGGCTGGCCAGCCAGGTGGAGGCCCATCACTCGCTGGTGCTCAGCCACCTCAAGACTCTG
CTCTGGAAGAAGATCTCCAACACCAAGTACTCTTGA

Translation (431 aa):
MRRLRRLAHLVLFCPFSKRLQGRLPGLRVRCIFLAWLGVFAGSWLVYVHYSSYSERCRGHVCQVVICDQY
RKGIISGSVCQDLCELHMVEWRTCLSVAPGQQVYSGLWRDKDVTIKCGIEETLDSKARSDAAPRRELVLF
DKPTRGTSIKEFREMTLSFLKANLGDLPSLPALVGQVLLMADFNKDNRVSLAEAKSVWALLQRNEFLLLL
SLQEKEHASRLLGYCGDLYLTEGVPHGAWHAAALPPLLRPLLPPALQGALQQWLGPAWPWRAKIAIGLLE
FVEELFHGSYGTFYMCETTLANVGYTATYDFKMADLQQVAPEATVRRFLQGRRCEHSTDCTYGRDCRAPC
DRLMRQCKGDLIQPNLAKVCALLRGYLLPGAPADLREELGTQLRTCTTLSGLASQVEAHHSLVLSHLKTL
LWKKISNTKYS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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