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Report for CCDS70185.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70185.1 Public Mus musculus 11 Kif3a 23 108 98 CCDS HistoryNCBI Gene:16568Re-query CCDS DB by CCDS ID:70185.1Re-query CCDS DB by GeneID:16568See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70185.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057330.14 ENSMUSP00000056197.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057330.14Link to Ensembl Protein Viewer:ENSMUSP00000056197.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000057330Re-query CCDS DB by Protein ID:ENSMUSP00000056197
Original member Current member NCBI NM_001290805.1 NP_001277734.1 Accepted alive Link to Nucleotide Sequence:NM_001290805.1Link to Protein Sequence:NP_001277734.1Re-query CCDS DB by Nucleotide ID:NM_001290805Re-query CCDS DB by Protein ID:NP_001277734Link to BLAST:NP_001277734.1

Chromosomal Locations for CCDS 70185.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 53567526 53567531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53570536 53570809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53578844 53578988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53579100 53579184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53579728 53579833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53583227 53583366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53583815 53584012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53584271 53584445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53586835 53586930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53593374 53593530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53593919 53594099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53594277 53594387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53594826 53594951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53597959 53598012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53598294 53598362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53598707 53598831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 53601011 53601059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2097 nt):
ATGCCGATCAATAAGTCGGAGAAGCCGGAAAGCTGCGATAATGTGAAGGTGGTGGTTAGGTGCCGGCCTC
TCAATGAGAGAGAGAAGTCAATGTGCTATAGACAGGCCGTCAGCGTGGATGAAATGAGGGGAACTATCAC
CGTCCATAAGACCGATTCCTCCAACGAACCTCCAAAGACATTTACTTTCGATACTGTTTTTGGACCAGAA
AGTAAACAACTTGATGTGTATAACTTAACTGCAAGACCAATTATTGATTCTGTTCTGGAAGGCTACAATG
GGACCATCTTTGCATATGGACAGACTGGGACAGGCAAGACTTTCACCATGGAAGGCGTTCGAGCAGTACC
GGGGCTCAGAGGGGTCATCCCCAACTCATTTGCTCACATATTTGGTCACATCGCAAAAGCAGAGGGCGAC
ACAAGGTTTTTGGTTCGAGTGTCATACTTGGAGATATATAATGAAGAAGTTCGAGACCTTTTGGGTAAAG
ATCAGACCCAGAGGTTAGAGGTTAAAGAAAGGCCTGATGTGGGAGTATATATCAAAGACTTATCAGCATA
TGTAGTCAACAACGCTGACGACATGGATAGAATCATGACTCTAGGCCACAAAAACCGTTCTGTCGGTGCG
ACTAATATGAACGAGCACAGCTCCCGATCCCACGCCATCTTTACAATTACTATAGAGTGCAGTGAGAAAG
GCGTGGACGGGAACATGCACGTCAGGATGGGCAAGCTCCACCTTGTGGATCTGGCTGGGTCAGAAAGACA
AGCAAAAACTGGAGCCACAGGACAGCGCCTCAAGGAAGCTACCAAAATCAACCTTTCATTGTCTACCCTG
GGCAACGTTATTTCTGCCTTGGTGGATGGAAAAAGCACTCACGTGCCGTATCGGAACTCCAAACTGACCC
GTCTCCTGCAGGACTCCTTAGGAGGGAACTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGATTA
TAATTATGATGAAACTATCAGCACCTTGCGGTATGCCAACCGCGCCAAGAACATTAAAAACAAAGCGAGA
ATCAATGAGGACCCAAAGGATGCTCTGCTCCGCCAGTTTCAGAAAGAAATCGAAGAGCTGAAGAAAAAGC
TTGAGGAAGGGGAAGAAGTGTCAGGCTCTGACATCAGTGGGTCAGAGGAGGATGACGAGGAGGGTGAACT
TGGAGAAGATGGAGAAAAAAAGAAAAAGAGAAGGGGTAAAAAGAAAGTTTCCCCAGATAAGATGGTGGAA
ATGCAAGCGAAAATTGACGAGGAGAGAAAAGCACTGGAAACCAAACTTGACATGGAAGAAGAAGAAAGAA
ACAAGGCTAGAGCTGAACTAGAGAGACGGGAGAAGGACCTTCTGAAAGCCCAACAAGAGCATCAGTCTTT
GCTGGAAAAGCTGTCTGCTTTGGAAAAGAAGGTCATTGTCGGCGGCGTGGACCTGCTGGCCAAGGCTGAG
GAGCAAGAGAAGCTTCTGGAGGAGTCCAACATGGAGCTGGAGGAGAGGAGGAGACGAGCTGAGCAGCTTC
GGAAAGAGCTGGAGGAAAAGGAGCAAGAACGCTTGGACATCGAGGAAAAATATACCAGTCTGCAAGAGGA
GGCACAAGGAAAGACCAAGAAATTAAAGAAAGTCTGGACCATGCTGATGGCTGCAAAGTCAGAGATGGCT
GATCTCCAGCAGGAGCATCAGAGGGAGATCGAAGGCCTCCTGGAGAACATCCGGCAGCTCAGCCGGGAGC
TCCGTCTTCAGATGCTCATCATTGATAACTTCATACCTCAGGATTACCAGGAAATGATTGAAAACTACGT
CCACTGGAATGAAGACATAGGAGAATGGCAGCTAAAATGTGTGGCCTACACAGGAAATAACATGAGGAAA
CAAACTCCAGTCCCTGACAAGAAGGAGAGAGACCCATTTGAAGTCGACCTTTCCCACGTGTACCTCGCCT
ATACAGAGGAGAGTCTGCGTCAGTCTCTGATGAAGTTAGAAAGGCCACGGACCTCCAAGGGGAAAGCAAG
GCCAAAGATGGGGCGAAGAAAGCGTTCTGCAAAGCCTGAGACCGTAATTGATTCTTTACTTCAGTAA

Translation (698 aa):
MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPE
SKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGD
TRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGA
TNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTL
GNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKAR
INEDPKDALLRQFQKEIEELKKKLEEGEEVSGSDISGSEEDDEEGELGEDGEKKKKRRGKKKVSPDKMVE
MQAKIDEERKALETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAE
EQEKLLEESNMELEERRRRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMA
DLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRK
QTPVPDKKERDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKMGRRKRSAKPETVIDSLLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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