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Report for CCDS7045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7045.1 Public Homo sapiens 9 PNPLA7 24 110 108 CCDS HistoryNCBI Gene:375775Re-query CCDS DB by CCDS ID:7045.1Re-query CCDS DB by GeneID:375775See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000277531.8 ENSP00000277531.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000277531.8Link to Ensembl Protein Viewer:ENSP00000277531.4Re-query CCDS DB by Nucleotide ID:ENST00000277531Re-query CCDS DB by Protein ID:ENSP00000277531
Original member Current member NCBI NM_152286.5 NP_689499.4 Accepted alive Link to Nucleotide Sequence:NM_152286.5Link to Protein Sequence:NP_689499.4Re-query CCDS DB by Nucleotide ID:NM_152286Re-query CCDS DB by Protein ID:NP_689499Link to BLAST:NP_689499.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689499.4 1317 Q6ZV29-1 1317 100% 0 0

Chromosomal Locations for CCDS 7045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137460393 137460476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137460634 137460737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137461536 137461620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137461931 137462041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137462179 137462331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137462685 137462833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137463415 137463531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137464126 137464195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137464340 137464456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137467317 137467473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137478034 137478152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137479056 137479238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137480312 137480480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137480960 137481023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137484587 137484736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137493013 137493082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137495033 137495146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137497187 137497310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137498114 137498245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137500691 137500896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137501650 137501727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137505614 137505760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137505983 137506083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137515379 137515519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137519917 137520043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137521636 137521716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137522729 137522857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137540642 137540722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137542642 137542801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137543432 137543572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137543724 137543815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137546830 137546909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137547309 137547396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137550168 137550197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3954 nt):
ATGGAGGAAGAGAAAGATGACAGCCCACAGCTGACGGGGATTGCAGTTGGAGCCCTCCTGGCCCTGGCCT
TGGTTGGTGTCCTCATCCTTTTCATGTTCAGAAGGCTTAGACAATTTCGACAAGCACAGCCCACTCCTCA
GTACCGGTTCCGGAAGAGAGACAAAGTGATGTTTTACGGCCGGAAGATCATGAGGAAGGTGACCACACTC
CCCAACACCCTTGTGGAGAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGGTGCTGTCTT
TGGCCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCTCCCT
GCTGGAGGCCGACCTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACATGCTG
AAAAACGTTCGGGTCCTGGGCCACTTTGAGAAGCCGCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTG
TGCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGGA
CGGGCGGCTGGAGGTCTGCATCCAGGACACTGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGA
GACAGCGTCCACAGCCTGCTCAGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCT
CCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAA
ATATCCGGAAACTCTGGTGAGGGTGGTGCAGATCATCATGGTGCGGCTGCAGAGGGTGACCTTTCTGGCT
CTGCACAACTACCTCGGCCTGACCACAGAGCTCTTCAACGCTGAGAGCCAGGCCATCCCTCTCGTGTCTG
TAGCCAGTGTGGCTGCCGGGAAGGCCAAGAAGCAGGTGTTCTATGGCGAAGAAGAGCGGCTTAAAAAGCC
ACCGCGGCTCCAGGAGTCCTGTGACTCAGATCACGGGGGCGGCCGCCCGGCAGCTGCTGGGCCCCTGCTG
AAGAGGAGCCACTCCGTCCCCGCGCCTTCCATTCGCAAACAGATCTTGGAGGAGCTGGAGAAGCCCGGGG
CAGGTGACCCTGACCCTTCGGCCCCACAAGGGGGCCCAGGCAGTGCCACTTCTGATCTGGGGATGGCATG
TGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAAA
AGCGTGATGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGACCCTGG
CCAGCAGGAAGTCGGATGCCATCTTCAGAGCTGCCAAGAAGGACCTGCTCACCCTGATGAAGCTGGAAGA
CTCATCTCTGTTGGATGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGCAGGGA
GACCAGGACGCCAGCATCCTGTTCGTGGTCTCGGGGCTGCTGCACGTGTACCAGCGGAAGATCGGCAGCC
AGGAGGACACCTGCTTGTTCCTCACGCGCCCCGGGGAGATGGTGGGCCAGCTGGCCGTGCTCACCGGGGA
GCCTCTCATCTTCACCGTCAAGGCCAACAGGGACTGCAGCTTCCTGTCCATCTCCAAGGCCCACTTCTAT
GAAATCATGCGGAAGCAGCCGACCGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAGGATGTCGTCCT
TCGTGCGGCAAATCGACTTTGCCCTGGACTGGGTGGAGGTGGAGGCCGGGCGAGCAATATACAGGCAGGG
GGACAAGTCCGACTGCACGTACATCATGCTCAGCGGCCGGCTGCGCTCTGTGATCCGGAAGGATGATGGG
AAGAAGCGCCTGGCCGGGGAGTACGGCCGAGGAGACCTCGTCGGCGTGGTGGAGACACTGACCCACCAGG
CCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGCCCTCACGTC
CATCAAGCGCAGGTACCCACAGGTGGTGACTCGGCTGATTCATCTCTTGGGTGAGAAGATCCTGGGCAGC
CTCCAGCAGGGACCTGTGACAGGCCACCAGCTTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTTGGGGA
ACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTCACCGCCTTCGC
CCTGGAGCTGGAGCATGCCCTCAGCGCCATCGGCCCGACCCTGCTGCTGACTAGTGACAACATAAAACGG
CGCCTTGGCTCCGCTGCCCTGGACAGTGTTCACGAGTACCGGCTGTCCAGCTGGCTGGGGCAGCAGGAGG
ACACCCACAGGATCGTGCTCTACCAGGCAGATGGCACGCTCACACCCTGGACCCAGCGCTGCGTGCGCCA
GGCCGACTGCATCCTCATCGTGGGCCTGGGTGACCAGGAGCCCACAGTGGGCGAGCTGGAGCGGATGCTG
GAGAGCACAGCTGTGCGTGCCCAGAAGCAGCTGATCCTGCTGCACAGGGAGGAGGGCCCGGCGCCAGCGC
GCACCGTGGAGTGGCTCAACATGCGGAGCTGGTGCTCCGGCCACCTGCACCTCTGCTGCCCGCGCCGCGT
CTTCTCCAGGAGGAGCCTGCCCAAGCTGGTGGAGATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCGA
CACTCAGACTTCTCCCGCCTGGCGAGGGTGCTGACGGGCAACGCCATTGCCCTGGTGCTTGGGGGAGGGG
GAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGGT
GGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTGAGGAGCGGAACTACAGCCAGATGCGG
ATCCGGGCCAAGCAGTGGGCCGAGGGCATGACGTCCTTGATGAAGGCCGCGCTGGACCTCACCTACCCCA
TCACGTCCATGTTCTCCGGAGCCGGCTTCAACAGCAGCATCTTCAGCGTCTTCAAGGACCAGCAGATCGA
GGACCTGTGGATTCCTTATTTCGCCATCACCACCGACATCACAGCCTCGGCCATGCGGGTCCACACCGAC
GGCTCCCTGTGGTGGTACGTGCGTGCCAGCATGTCCCTGTCCGGTTACATGCCCCCTCTCTGTGACCCGA
AGGACGGACACCTGCTGATGGACGGGGGCTACATCAACAACCTCCCAGCGGATGTGGCCCGGTCCATGGG
GGCAAAAGTGGTGATCGCCATTGACGTGGGCAGCCGAGATGAGACGGACCTCACCAACTATGGGGATGCG
CTGTCTGGGTGGTGGCTGCTGTGGAAACGCTGGAACCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGG
CAGAGATTCAGACGCGCCTGGCCTACGTGTGTTGCGTGCGGCAGCTGGAGGTGGTGAAGAGCAGTGACTA
CTGCGAGTACCTGCGCCCCCCCATCGACAGCTACAGCACCCTGGACTTCGGCAAGTTCAACGAGATCTGC
GAAGTGGGCTACCAGCACGGGCGCACGGTGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGAAGATGC
TCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGCCTCCTTCAC
GGACCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGACGAATCTGACTAC
CAGACGGAGTACGAGGAGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAGACTTCCAGAGCACCTCAG
CCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTCACTGCGGCATCGACACCCCAGTCTGGCTTTCCCAAA
ACTGTCTGAGGGCTCCTCTGACCAGGACGGGTAG

Translation (1317 aa):
MEEEKDDSPQLTGIAVGALLALALVGVLILFMFRRLRQFRQAQPTPQYRFRKRDKVMFYGRKIMRKVTTL
PNTLVENTALPRQRARKRTKVLSLAKRILRFKKEYPALQPKEPPPSLLEADLTEFDVKNSHLPSEVLYML
KNVRVLGHFEKPLFLELCKHIVFVQLQEGEHVFQPREPDPSICVVQDGRLEVCIQDTDGTEVVVKEVLAG
DSVHSLLSILDIITGHAAPYKTVSVRAAIPSTILRLPAAAFHGVFEKYPETLVRVVQIIMVRLQRVTFLA
LHNYLGLTTELFNAESQAIPLVSVASVAAGKAKKQVFYGEEERLKKPPRLQESCDSDHGGGRPAAAGPLL
KRSHSVPAPSIRKQILEELEKPGAGDPDPSAPQGGPGSATSDLGMACDRARVFLHSDEHPGSSVASKSRK
SVMVAEIPSTVSQHSESHTDETLASRKSDAIFRAAKKDLLTLMKLEDSSLLDGRVALLHVPAGTVVSRQG
DQDASILFVVSGLLHVYQRKIGSQEDTCLFLTRPGEMVGQLAVLTGEPLIFTVKANRDCSFLSISKAHFY
EIMRKQPTVVLGVAHTVVKRMSSFVRQIDFALDWVEVEAGRAIYRQGDKSDCTYIMLSGRLRSVIRKDDG
KKRLAGEYGRGDLVGVVETLTHQARATTVHAVRDSELAKLPAGALTSIKRRYPQVVTRLIHLLGEKILGS
LQQGPVTGHQLGLPTEGSKWDLGNPAVNLSTVAVMPVSEEVPLTAFALELEHALSAIGPTLLLTSDNIKR
RLGSAALDSVHEYRLSSWLGQQEDTHRIVLYQADGTLTPWTQRCVRQADCILIVGLGDQEPTVGELERML
ESTAVRAQKQLILLHREEGPAPARTVEWLNMRSWCSGHLHLCCPRRVFSRRSLPKLVEMYKHVFQRPPDR
HSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKALAECGIPVDMVGGTSIGAFVGALYSEERNYSQMR
IRAKQWAEGMTSLMKAALDLTYPITSMFSGAGFNSSIFSVFKDQQIEDLWIPYFAITTDITASAMRVHTD
GSLWWYVRASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDA
LSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEIC
EVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIEPAKPAMVDDESDY
QTEYEEELLDVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEGSSDQDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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