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Report for CCDS70774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70774.1 Public Mus musculus 17 Pigq 23 108 98 CCDS HistoryNCBI Gene:14755Re-query CCDS DB by CCDS ID:70774.1Re-query CCDS DB by GeneID:14755See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097368.9 ENSMUSP00000094981.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097368.9Link to Ensembl Protein Viewer:ENSMUSP00000094981.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000097368Re-query CCDS DB by Protein ID:ENSMUSP00000094981
Original member NCBI NM_001291025.1 NP_001277954.1 Updated not alive Link to Nucleotide Sequence:NM_001291025.1Link to Protein Sequence:NP_001277954.1Re-query CCDS DB by Nucleotide ID:NM_001291025Re-query CCDS DB by Protein ID:NP_001277954
Current member NCBI NM_001291025.2 NP_001277954.1 Accepted alive Link to Nucleotide Sequence:NM_001291025.2Link to Protein Sequence:NP_001277954.1Re-query CCDS DB by Nucleotide ID:NM_001291025Re-query CCDS DB by Protein ID:NP_001277954Link to BLAST:NP_001277954.1

Chromosomal Locations for CCDS 70774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25927604 25927756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25928791 25928852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25930521 25930635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25930958 25931038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25931462 25931573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25931674 25931827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25932105 25932231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25934094 25934273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25934758 25934878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25935003 25935134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25936764 25937452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGGTGCTCAAGGTCTTCTTCCCCACGTGCTGTGCCTCGGCAGACAGTGGCCTGTTAGTGGGACGATGGG
TTCCAGGACAGAGCAGTGCTGTGATCCTGGCCGTGGTGCACTTTCCCTTCATCCCCATCCAAGTCAAGGA
GCTCCTGGCCCAGGTGCAGAAGGCCAGTCAAGTACCAGTGGCTGTGCTAGGGACCTGGTGCCACCGTCAG
CAGGAACCGCAGGAGAGCCTGGGGAATTTCCTGGAGGGCCTGGGCACCATCTTCTCCCATGACCCCTGGT
TGCAGCTCTGCCGGGAGAGGGGTACCAGACTCTGGAGCTGCAAGGCCACTTACCCGCAGATGTCTAACCC
TCTGGACATGCACCCCGAAGAGCAGGTCATGCTCATCTTCTATGATCAGCGCAAGCTGCTGCTCTCCTGG
TTGCATCCGCCTCCAGTCCTGCCTGCCTGCCAGATGGGAGACACCACAGCCAGCACCGGAGGCCTAGCTG
ACATCTTTGACACAGTGGCACGCAGCGAGGTGCTCTTCCGAAATGACCAATTTGATGAGAGACCCGTACG
CCTGAGCCACTGGCAATCAGAGGGAGTGGAGGCCAGCATACTTGTGGAGTTGGCAAAGCGGGCCTCTGGG
CCTGTCTGCCTGCTGCTGGCTTCTCTGTTGTCCCTGATCTCAGCAGCTAGTGCTTGCCGGCTATGGAAGC
TGTGGCCACTTTCCTTCATCAGAAGCAAGCTCTCCACTTGTGAGCAGCTCCATCACCGGCTGAAGCACCT
CTCCTTCATCTTCAGCACGGAGAAAGCCCAGAATCCCATGCAGCTGATGAGGAAGGCCAACATGCTGGTT
TCTGTGCTACTGGATGTGGCCCTTGGCTTGCTGCTGCTCTCTTGGCTCCACAGCAATAACCGAATTGGAC
AGCTGGCCAATGCCCTGGTCCCTGTGGCTGATAGTCAAAGCAGTGTCTCCGTGGAAGTCTTGTGGGCTCT
CTTCTGCTCCGTCAGTGCGGATGCCTGCTGGGTCTGTTTGTTGCCAGGCCAGGAATCTGGGGCAGCAGTG
GGCTCCTCTCAGCTTTGTGAGATCTGTGGAGGTCATCCCAGTAGGAAAGAGGAGCTGGAGCTGGGTGAAC
GGCGCGTGGCTGAGGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGCTCCTGCTGGGCTCAAGATGAA
TCGGGCACTGGATCAGGTGCTAGGCCGCTTTTTCCTGTACCACATCCATCTGTGGATAAGCTATATCCAC
CTTATGTCCCCCTTTATTGAGCATATCCTGTGGCATGTGGGACTCTCAGCCTGCCTTGGACTGACTGTTG
CTCTGTCCATCTTTTCGGATATCATCGCCCTTCTCACCTTCCACATCTATTGCTTCTATGTCTACGGTGC
CAGGCTGTACTGCCTGAAGATCTATGGCCTTTCCTCTCTCTGGCGTCTGTTCCGGGGGAAGAAGTGGAAT
GTTCTGCGCCAGCGAGTGGATTCTTGTTCCTATGACCTTGACCAGCTCTTCATTGGGACCTTGCTCTTCA
CCATCCTGGTCTTCTTGCTACCCACCACCGCTCTGTACTACCTGGTATTCACCCTGCTCCGGCTCCTGGT
GATCACTGTGCAAGGCTTAATCCATCTACTTGTAGACCTCATCAATTCCCTGCCACTATACTCCCTTGGC
CTTCGACTCTGCCGACCCTACAGGCTGGCAGCTGGTGTGAAGTTCAGAGTTCTGGAAAAGGAGGCAGGCA
GACCCCTCCGCCTCCTGATGCAGATAAACCCCCTGTCCTATAACCATGTGATGCACATCTACCGTCTGCC
TCGCTGTGGCTGCCATCCCAAGCACTCCTGGGGTACCCTGTGCCGAAAGCTGGTCTTCGGAGAGCTCATC
TACCCCTGGAGGCAGAGAGAGGACAAACAGGACTGA

Translation (641 aa):
MVLKVFFPTCCASADSGLLVGRWVPGQSSAVILAVVHFPFIPIQVKELLAQVQKASQVPVAVLGTWCHRQ
QEPQESLGNFLEGLGTIFSHDPWLQLCRERGTRLWSCKATYPQMSNPLDMHPEEQVMLIFYDQRKLLLSW
LHPPPVLPACQMGDTTASTGGLADIFDTVARSEVLFRNDQFDERPVRLSHWQSEGVEASILVELAKRASG
PVCLLLASLLSLISAASACRLWKLWPLSFIRSKLSTCEQLHHRLKHLSFIFSTEKAQNPMQLMRKANMLV
SVLLDVALGLLLLSWLHSNNRIGQLANALVPVADSQSSVSVEVLWALFCSVSADACWVCLLPGQESGAAV
GSSQLCEICGGHPSRKEELELGERRVAEELQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIH
LMSPFIEHILWHVGLSACLGLTVALSIFSDIIALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWN
VLRQRVDSCSYDLDQLFIGTLLFTILVFLLPTTALYYLVFTLLRLLVITVQGLIHLLVDLINSLPLYSLG
LRLCRPYRLAAGVKFRVLEKEAGRPLRLLMQINPLSYNHVMHIYRLPRCGCHPKHSWGTLCRKLVFGELI
YPWRQREDKQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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