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Report for CCDS70776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70776.1 Public Mus musculus 17 Nudt3 23 108 98 CCDS HistoryNCBI Gene:56409Re-query CCDS DB by CCDS ID:70776.1Re-query CCDS DB by GeneID:56409See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70776.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114886.7 ENSMUSP00000110536.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114886.7Link to Ensembl Protein Viewer:ENSMUSP00000110536.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114886Re-query CCDS DB by Protein ID:ENSMUSP00000110536
Original member Current member NCBI NM_001291046.1 NP_001277975.1 Accepted alive Link to Nucleotide Sequence:NM_001291046.1Link to Protein Sequence:NP_001277975.1Re-query CCDS DB by Nucleotide ID:NM_001291046Re-query CCDS DB by Protein ID:NP_001277975Link to BLAST:NP_001277975.1

Chromosomal Locations for CCDS 70776.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 27580788 27580954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27582008 27582092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27583212 27583256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27596724 27596834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27622591 27622602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGAGTCGTAGGGTGCTGCTTGTGAGCAGTAGCCGCCATCCAGACCGATGGATTGTCCCCGGAGGAGGCA
TGGAGCCTGAGGAGGAGCCAAGTGTGGCAGCTGTCCGGGAAGTGTGTGAGGAGGCTGGAGTGAAAGGGAC
ACTGGGAAGACTAGTTGGAATTTTTGAGAACCAGGAGAGGAAGCACAGGACCTACGTGTATGTGCTCATC
GTCACGGAGGTGCTGGAAGACTGGGAGGACTCGGTGAACATCGGAAGGAAGAGAGAGTGGTTTAAAATAG
AAGACGCCATAAAGGTGCTGCAGTGTCACAAGCCCGTGCAGGCGTCATACTTTGAGACGTTGAGGCAAGG
CTACCCTGCCAACAACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCTCCGTGTCAGGCATCAGATGA

Translation (139 aa):
MSRRVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLI
VTEVLEDWEDSVNIGRKREWFKIEDAIKVLQCHKPVQASYFETLRQGYPANNGTPVVPTTYSSSVSGIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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