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Report for CCDS7099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7099.1 Public Homo sapiens 10 BEND7 24 110 108 CCDS HistoryNCBI Gene:222389Re-query CCDS DB by CCDS ID:7099.1Re-query CCDS DB by GeneID:222389See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341083.7 ENSP00000345773.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341083.7Link to Ensembl Protein Viewer:ENSP00000345773.3Re-query CCDS DB by Nucleotide ID:ENST00000341083Re-query CCDS DB by Protein ID:ENSP00000345773
Original member Current member NCBI NM_152751.3 NP_689964.2 Accepted alive Link to Nucleotide Sequence:NM_152751.3Link to Protein Sequence:NP_689964.2Re-query CCDS DB by Nucleotide ID:NM_152751Re-query CCDS DB by Protein ID:NP_689964Link to BLAST:NP_689964.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689964.2 468 Q8N7W2-3 468 99.7863% 0 1

Chromosomal Locations for CCDS 7099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 13439172 13439497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13447266 13447319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13452539 13452658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13480899 13481124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13492611 13492876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13496766 13496888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13499778 13500069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGAAATAAAAAAGCAAATTACAGGGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGC
GAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT
GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCC
CAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCACCCTACCA
CGAGCTCCAATGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCA
GTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGA
ACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAA
ATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGA
GATGGAGAAAAAGTCGGTGGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAG
GAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTG
AAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAG
CCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGG
AAGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCT
TCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTACAGATTCT
ACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCTCAGCAGAGATCGCGGACAGTGATGAA
AGACTGGACGGCATTGCTCTACCACCAACAGGTGCTTGTGGTGGGCCCTGCACTGTTCTGCCGGGTGGGA
GTGCAGCGGTGACCCTAGTCTTGCAGAGCTCACCTCAGACAATGTCACAAGAAAAGGGACAGATGGCAGA
ACCCTGGGAGGAGCAGCATCTCGTGCTCCTGAACAACCTTACCAGAGACAGAGCTGAAACAGGAGCTTTG
TCCCAAACCAGCCAAGACTTCAAGCACCATTCATTCCTCATAACTCAGGTCTCAGCTACACTTCATCATC
AGAGAGGGATTCGCAACTTTCCCACGCCAGGCTCAGCCAAGTCTCTTACCCTTCACATCTCTTGCCTCTC
TCTCTGA

Translation (468 aa):
MEIKKQITGMRRLLNDSTGRIYQRVGKEGEKLKEEPQDLDLVWPPRLNSSAEAPQSLHPSSRGVWNELPP
QSGQFSGQYGTRSRTFQSQPHPTTSSNGELPVVNSSAGSNCCTCNCQSTLQAILQELKTMRKLMQIQAVG
TQNRQQPPISLICSQRTAVSRKRNKKKKVPPKTVEPLTVKQKPSGSEMEKKSVVASELSALQAAEHTSPE
ESRVLGFGIVLESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNG
KRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEIADSDE
RLDGIALPPTGACGGPCTVLPGGSAAVTLVLQSSPQTMSQEKGQMAEPWEEQHLVLLNNLTRDRAETGAL
SQTSQDFKHHSFLITQVSATLHHQRGIRNFPTPGSAKSLTLHISCLSL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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