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Report for CCDS7110.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7110.1 Public Homo sapiens 10 MINDY3 24 110 108 CCDS HistoryNCBI Gene:80013Re-query CCDS DB by CCDS ID:7110.1Re-query CCDS DB by GeneID:80013See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7110.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000277632.8 ENSP00000277632.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000277632.8Link to Ensembl Protein Viewer:ENSP00000277632.3Re-query CCDS DB by Nucleotide ID:ENST00000277632Re-query CCDS DB by Protein ID:ENSP00000277632
Original member Current member NCBI NM_024948.4 NP_079224.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024948.4Link to Protein Sequence:NP_079224.1Re-query CCDS DB by Nucleotide ID:NM_024948Re-query CCDS DB by Protein ID:NP_079224Link to BLAST:NP_079224.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079224.1 445 Q9H8M7-1 445 100% 0 0

Chromosomal Locations for CCDS 7110.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 15778992 15779141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15782155 15782226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15786561 15786648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15789247 15789319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15796100 15796172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15816835 15816915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15821656 15821726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15833630 15833709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15834543 15834616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15837204 15837318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15838228 15838279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15841426 15841599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15843212 15843272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15847864 15847943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 15860206 15860299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGTCCGAACTGACTAAAGAGCTGATGGAGCTGGTGTGGGGCACCAAGAGCAGCCCCGGTCTCTCGGACA
CCATTTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAGTGAATCAGAGGGATCTGCATTAGAACAGTTTGA
AGGTGGCCCCTGTGCTGTTATTGCACCTGTTCAGGCATTTCTTTTGAAGAAGCTCCTGTTTTCTTCGGAG
AAGTCTTCTTGGCGGGATTGTTCAGAGGAAGAGCAGAAGGAACTCCTTTGTCATACCTTGTGTGATATTT
TAGAAAGTGCTTGTTGTGACCACTCTGGATCATACTGCTTGGTTTCATGGTTAAGAGGAAAGACAACTGA
GGAAACTGCTAGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCT
GTCGAAGAGCTTGGCTTTGAGCGATTTCATGCATTAATTCAAAAAAGATCGTTCAGAAGTTTACCAGAAT
TAAAAGATGCTGTCTTGGACCAGTATTCAATGTGGGGAAATAAATTTGGAGTATTGCTTTTTCTGTATTC
TGTATTACTGACAAAGGGCATTGAAAACATAAAAAACGAAATTGAAGATGCAAGTGAACCCTTGATAGAT
CCTGTATATGGACATGGCAGCCAAAGTTTAATTAATCTCCTGCTGACGGGACATGCTGTTTCTAATGTAT
GGGATGGTGATAGAGAGTGCTCAGGAATGAAACTTCTTGGTATACATGAACAAGCAGCAGTAGGATTTTT
AACACTAATGGAAGCTTTAAGATACTGTAAGGTTGGTTCTTACTTGAAATCTCCAAAATTCCCTATTTGG
ATTGTTGGCAGTGAGACTCACCTCACCGTATTTTTTGCCAAGGATATGGCTTTAGTTGCCCCTGAAGCTC
CTTCAGAACAAGCCAGAAGAGTTTTTCAAACCTACGACCCAGAAGATAATGGATTCATACCCGATTCACT
TCTGGAAGATGTGATGAAAGCATTGGACCTTGTTTCAGATCCTGAATATATAAATCTCATGAAGAATAAA
TTAGATCCAGAAGGATTAGGAATCATATTATTGGGCCCATTTCTTCAAGAATTTTTTCCTGATCAGGGCT
CCAGTGGTCCAGAATCTTTTACTGTCTACCACTACAATGGATTGAAGCAGTCAAATTATAATGAAAAGGT
CATGTACGTAGAAGGGACTGCAGTTGTGATGGGTTTTGAAGATCCCATGCTACAGACAGATGACACTCCT
ATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTCTGGACCACAGATCGCTCTCCTTCAC
TAAATTAA

Translation (445 aa):
MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAFLLKKLLFSSE
KSSWRDCSEEEQKELLCHTLCDILESACCDHSGSYCLVSWLRGKTTEETASISGSPAESSCQVEHSSALA
VEELGFERFHALIQKRSFRSLPELKDAVLDQYSMWGNKFGVLLFLYSVLLTKGIENIKNEIEDASEPLID
PVYGHGSQSLINLLLTGHAVSNVWDGDRECSGMKLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIW
IVGSETHLTVFFAKDMALVAPEAPSEQARRVFQTYDPEDNGFIPDSLLEDVMKALDLVSDPEYINLMKNK
LDPEGLGIILLGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEDPMLQTDDTP
IKRCLQTKWPYIELLWTTDRSPSLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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