CCDS Report for Consensus CDS

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Report for CCDS7142.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
7142.1	Public	Homo sapiens	10	ARMC3	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7142.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000298032.10	ENSP00000298032.5	MANE Select	Accepted	alive
		NCBI	NM_173081.5	NP_775104.2	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_775104.2	872	Q5W041-2	872	100%	0	0

Chromosomal Locations for CCDS 7142.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)

Genome Browser links:

Chromosome	Start	Stop
10	22931997	22932044
10	22946144	22946261
10	22955807	22955932
10	22959070	22959138
10	22959399	22959574
10	22961884	22962078
10	22968306	22968489
10	22981340	22981492
10	22981595	22981700
10	22998148	22998397
10	23001919	23002055
10	23003246	23003414
10	23006884	23006981
10	23008276	23008374
10	23008815	23008931
10	23030596	23030796
10	23032861	23033023
10	23037270	23037479

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2619 nt):
ATGGGTAAAAAGATAAAGAAGGAAGTAGAGCCTCCTCCTAAGGATGTGTTTGACCCATTAATGATTGAAA GCAAAAAAGCAGCAACTGTGGTGTTAATGCTTAATTCTCCAGAAGAGGAAATTTTGGCTAAAGCATGTGA AGCCATTTATAAATTTGCTTTAAAAGGTGAGGAAAATAAAACAACCCTCCTTGAACTTGGAGCTGTGGAA CCTTTAACTAAGCTACTCACCCATGAAGACAAAATTGTAAGAAGAAATGCTACTATGATATTTGGAATCC TGGCTTCTAATAATGATGTTAAAAAATTGTTAAGGGAGTTAGATGTCATGAATTCTGTCATTGCCCAGCT CGCTCCAGAAGAAGAAGTAGTTATCCATGAGTTTGCTAGTCTTTGTCTAGCAAACATGTCTGCAGAGTAC ACCAGTAAAGTGCAAATATTTGAACATGGGGGATTAGAGCCACTCATCAGACTACTGAGTAGCCCTGACC CGGATGTAAAGAAGAACTCTATGGAATGCATTTACAACTTGGTGCAGGATTTTCAGTGTCGAGCTAAACT TCAAGAACTAAATGCAATACCTCCTATCTTAGATCTCTTGAAGTCAGAATATCCAGTGATTCAGTTGTTG GCTCTCAAAACCTTAGGTGTTATTGCAAATGATAAGGAGTCTCGAACAATGCTAAGAGACAATCAAGGAT TGGACCATCTTATTAAGATCCTAGAAACTAAGGAATTGAATGACCTTCATATAGAAGCACTTGCAGTGAT AGCCAATTGCCTTGAAGACATGGATACTATGGTGCAGATTCAGCAGACAGGGGGTCTTAAAAAGCTCCTG TCATTTGCAGAAAACTCTACAATTCCTGATATTCAGAAGAATGCAGCAAAAGCCATTACTAAAGCAGCTT ATGATCCTGAAAATAGAAAACTTTTTCATGAACAAGAGGTTGAAAAGTGCCTTGTAGCCCTTTTGGGTTC TGAAAATGATGGAACTAAAATTGCTGCTTCCCAAGCTATTTCAGCAATGTGTGAGAATTCAGGCAGCAAA GATTTTTTCAATAATCAGGGGATTCCACAGTTAATTCAGTTGCTAAAAAGTGACAATGAAGAGGTACGGG AAGCAGCAGCTCTAGCCCTGGCAAACCTAACCACTTGCAACCCTGCTAATGCAAACGCTGCTGCTGAAGC TGATGGTATTGATCCATTAATAAACCTCCTGTCTAGTAAACGAGATGGAGCCATTGCCAACGCTGCTACA GTATTAACAAACATGGCCATGCAGGAGCCCCTGCGCCTGAACATACAGAATCACGACATCATGCATGCCA TCATCAGCCCACTGCGTTCTGCAAACACAGTCGTGCAGAGCAAAGCTGCTCTCGCTGTCACCGCAACTGC GTGTGACGTTGAAGCCCGGACTGAGTTAAGAAATTCTGGTGGATTGGAGCCCCTGGTAGAGCTGCTACGC TCCAAGAATGATGAAGTGAGGAAGCACGCCAGTTGGGCAGTGATGGTCTGTGCTGGTGACGAGCTGACGG CCAATGAATTATGCAGGCTCGGGGCTTTAGATATCCTTGAAGAAGTTAACGTATCAGGAACTCGGAAAAA TAAATTCAGTGAGGCAGCTTATAATAAGTTGCTCAATAACAATCTTTCCCTGAAATACAGCCAGACTGGC TATTTGTCATCAAGTAACATAATTAACGATGGATTCTATGATTATGGTCGGATAAATCCCGGCACCAAAC TGTTGCCTTTGAAGGAGCTCTGCTTACAAGAACCAAGTGACCTACGGGCTGTACTCTTAATCAACAGTAA ATCTTACGTTTCTCCACCTTCATCTATGGAAGATAAATCAGATGTTGGTTATGGACGAAGTATTTCTTCT TCATCTTCCTTAAGAAGATCAAGTAAAGAAAAGAACAAAAAAAATAGTTATCATTTTAGTGCTGGATTTG GATCTCCCATAGAAGACAAATCAGAGCCAGCTTCTGGACGAAATACTGTTCTCAGCAAAAGCGCCACCAA AGAAAAAGGATGGAGGAAAAGCAAAGGAAAAAAAGAAGAGGAAAAAGTGAAAGAGGAGGAAGAGGTTATG GTGGTACCAAAATTTGTTGGTGAAGGAAGCTCTGACAAAGAATGGTGTCCTCCCTCTGACCCTGATTTCT CTATGTATGTGTATGAGGTGACCAAATCAATACTGCCAATAACCAATATTAAGGAACAGATTGAGGATCT GGCAAAGTATGTAGCAGAAAAAATGGGTGGTAAGATTCCAAAAGAGAAACTACCTGATTTCAGCTGGGAA CTTCACATAAGTGAACTGAAATTTCAACTTAAATCCAATGTTATACCGATTGGACATGTCAAAAAAGGAA TCTTCTACCATCGAGCTTTGCTTTTCAAGGCTCTGGCTGATAGAATTGGCATTGGTTGCTCCCTAGTTCG CGGAGAGTACGGTAGAGCGTGGAATGAAGTCATGCTGCAGAATGACTCTCGGAAGGGAGTGATTGGGGGC CTCCCCGCTCCTGAGATGTACGTGATTGACCTCATGTTCCATCCAGGTGGACTGATGAAGTTGAGAAGTC GAGAGGCTGATCTTTACAGATTCATTTAA
Translation (872 aa):
MGKKIKKEVEPPPKDVFDPLMIESKKAATVVLMLNSPEEEILAKACEAIYKFALKGEENKTTLLELGAVE PLTKLLTHEDKIVRRNATMIFGILASNNDVKKLLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAEY TSKVQIFEHGGLEPLIRLLSSPDPDVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLKSEYPVIQLL ALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTGGLKKLL SFAENSTIPDIQKNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSK DFFNNQGIPQLIQLLKSDNEEVREAAALALANLTTCNPANANAAAEADGIDPLINLLSSKRDGAIANAAT VLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKAALAVTATACDVEARTELRNSGGLEPLVELLR SKNDEVRKHASWAVMVCAGDELTANELCRLGALDILEEVNVSGTRKNKFSEAAYNKLLNNNLSLKYSQTG YLSSSNIINDGFYDYGRINPGTKLLPLKELCLQEPSDLRAVLLINSKSYVSPPSSMEDKSDVGYGRSISS SSSLRRSSKEKNKKNSYHFSAGFGSPIEDKSEPASGRNTVLSKSATKEKGWRKSKGKKEEEKVKEEEEVM VVPKFVGEGSSDKEWCPPSDPDFSMYVYEVTKSILPITNIKEQIEDLAKYVAEKMGGKIPKEKLPDFSWE LHISELKFQLKSNVIPIGHVKKGIFYHRALLFKALADRIGIGCSLVRGEYGRAWNEVMLQNDSRKGVIGG LPAPEMYVIDLMFHPGGLMKLRSREADLYRFI

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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