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Report for CCDS72459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72459.1 Public Mus musculus X Adgrg2 23 108 98 CCDS HistoryNCBI Gene:237175Re-query CCDS DB by CCDS ID:72459.1Re-query CCDS DB by GeneID:237175See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72459.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112408.8 ENSMUSP00000108027.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112408.8Link to Ensembl Protein Viewer:ENSMUSP00000108027.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112408Re-query CCDS DB by Protein ID:ENSMUSP00000108027
Original member Current member NCBI NM_001290446.1 NP_001277375.1 Accepted alive Link to Nucleotide Sequence:NM_001290446.1Link to Protein Sequence:NP_001277375.1Re-query CCDS DB by Nucleotide ID:NM_001290446Re-query CCDS DB by Protein ID:NP_001277375Link to BLAST:NP_001277375.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277375.1 1006 Q8CJ12-2 1006 100% 0 0

Chromosomal Locations for CCDS 72459.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 160438196 160438313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160456005 160456037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160458835 160458873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160461343 160461381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160463328 160463369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160465578 160465631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160468892 160468947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160469768 160469823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160471756 160471795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160472312 160472349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160474704 160474798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160475491 160475557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160477049 160477440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160478985 160479147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160480227 160480383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160481547 160481690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160482289 160482411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483083 160483128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160483234 160483337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160484140 160484261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160485644 160485912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160487666 160487765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160488684 160488967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160491398 160491499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160492600 160492752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 160496305 160496489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3021 nt):
ATGCTTTTCTCTGGTGGGCAGTACAGCCCTGTTGGCAGACCTGAAGAGGTTTTACTGATATACAAGATAT
TCCTTGTCATCATTTGTTTTCATGTCATTCTCGTTACATCCCTGAAAGAAAACGGTAATTCCAGTTTGTT
ATCACCATCTGCTGAATCATCTCTTGTCAGTCTCATCCCCTACTCCAATGATGCTGCTTCAGAAGTTTTG
TCGACTTTAAACAAAACAGAAAAATCTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGAGTCAAAT
CCCAGAGAAATATCTGCAATTTGTCATCTCTTTGCAATGACTCAGTATTTTTTAGAGGTGAGATAGTGTT
TCAACATGATGAAGACCACAATGTTACCCAGAATCAAGATACAGCTAATGGCACCTTCGCTGGAGTCCTG
TCTCTAAGTGAACTGAAGCGATCAGAGCTCAACAAAACTCTACAGACCTTAAGTGAGACTTACTTTATAG
TGTGTGCTACAGCAGAGGCCCAAAGCACGGTAAACTGTACATTCACAGTAAAACTCAATGAGACCATGAA
TGTGTGTGCCATGATGGTTACTTTCCAAACTGTACAGATTCGGCCAATGGAACAGTGCTGCTGTTCCCCG
AGGACTCCCTGCCCTTCCTCACCAGAAGAGTTAGAAAAACTACAGTGTGAACTGCAGGATCCCATTGTCT
GTCTTGCTGATCAACCGCATGGCCCACCGTTATCGTCTTCCAGCAAGCCTGTTGTACCTCAGGCCACCAT
TATTTCCCATGTTGCTAGTGACTTCTCTTTGGCTGAACCCCTTGATCATGCCCTTATGACCCCAAGCACA
CCCTCTCTGACACAAGAAAGTAACCTTCCATCTCCTCAGCCTACGATCCCCCTGGCTTCCAGTCCTGCCA
CTGACTTGCCAGTTCAATCTGTAGTGGTCTCTTCTTTGCCTCAAACTGATCTTTCCCACACCCTGTCACC
GGTGCAGTCCTCCATTCCCTCTCCTACCACACCAGCCCCATCTGTCCCTACAGAACTGGTCACCATCAGC
ACACCTCCTGGTGAGACAGTTGTCAACACTAGCACTGTTTCTGATCTGGAAGCCCAAGTATCCCAGATGG
AGAAAGCTTTGTCTTTGGGTAGCTTAGAGCCTAATCTTGCAGGCGAAATGGTAAACCGAGTCAGCAAACT
CCTTCACTCTCCACCTGCCTTGCTAGCCCCTCTAGCTCAAAGGTTGCTAAAAGTGGTAGATGCCATTGGC
TTACAGCTGAATTTTTCATCTACAACTATCAGTCTAACTTCACCTTCTTTGGCTCTTGCTGTGATCAGAG
TGAATGCCAGTAATTTCAATACCACGACTTTTGCAGCCCAAGACCCAACAAATCTCCAGGTTTCTCTGGA
AACCCCACCTCCTGAGAATAGTATTGGTGCCATTACTCTGCCCTCATCACTGATGAATAATTTGCCAGCT
AATGATGTAGAATTGGCTTCAAGGATTCAGTTCAATTTCTTTGAAACACCCGCCCTGTTTCAGGATCCTT
CCCTGGAGAACCTCACTCTGATAAGCTATGTCATATCATCAAGTGTCACAAACATGACCATCAAGAACTT
GACAAGAAACGTGACAGTCGCACTGAAACACATCAACCCAAGTCCGGATGACTTAACTGTGAAATGTGTA
TTCTGGGACTTGGGCAGAAATGGTGGCAAAGGAGGTTGGTCATCTGATGGCTGTTCCGTCAAAGACAAGA
GAATGAATGAAACCATCTGTACCTGTAGCCATCTTACAAGTTTTGGCATCCTATTGGACCTATCTCGAAC
ATCCTTACCACCAAGTCAAATGATGGCTCTGACATTTATCACGTATATTGGCTGTGGGCTTTCATCAATT
TTTCTGTCAGTTACTCTTGTAACCTACATCGCCTTTGAAAAGATCCGGAGGGATTACCCCTCCAAAATCC
TCATCCAGCTGTGTGCTGCCCTGCTTCTGCTCAACCTGATCTTCCTCCTAGACTCCTGGATTGCGCTGTA
TAATACCCGAGGTTTCTGCATTGCCGTGGCTGTATTTCTTCACTATTTTCTCTTGGTCTCATTCACATGG
ATGGGATTAGAAGCATTCCACATGTACCTAGCACTGGTCAAGGTGTTTAATACTTACATCCGAAAGTACA
TCCTTAAATTCTGCATTGTTGGCTGGGGCATACCAGCTGTGGTTGTGTCCATCGTCCTGACTATATCCCC
AGATAACTATGGGATTGGATCCTATGGAAAATTCCCCAATGGCACACCAGATGACTTTTGCTGGATCAAC
AGCAATGTGGTGTTCTATATCACGGTTGTGGGATATTTCTGTGTGATATTTCTACTGAACGTCAGCATGT
TCATCGTGGTCTTGGTTCAGCTCTGTCGAATTAAAAAGAAGAAGCAGCTGGGAGCCCAGCGCAAAACTAG
TATTCAAGACCTCAGGAGTATCGCTGGCCTCACATTTTTACTGGGAATTACTTGGGGCTTTGCCTTCTTT
GCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTACAAGGGTTTTTCA
TATTCATTTTTTACTGTGCAGCAAAAGAGAATGTCAGAAAACAGTGGAGGCGGTATCTTTGTTGTGGAAA
ATTACGGCTGGCTGAAAATTCTGACTGGAGTAAAACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAAC
CAAGGAGTATCCAGCTCTTCAAATTCCTTACAGTCAAGCTGTAACTCCACTAACTCCACCACACTCCTAG
TGAATAGTGATTGCTCAGTGCACGCAAGCGGGAATGGCAATGCATCTACCGAGAGGAATGGGGTTTCTTT
CAGTGTTCAGAATGGAGACGTGTGCCTTCATGATCTCACTGGCAAACAGCATATGTTTAGTGACAAAGAG
GACTCCTGCAATGGTAAAAGCCGGATAGCGCTCAGAAGGACTTCGAAGCGGGGAAGCTTACACTTTATCG
AGCAAATGTGA

Translation (1006 aa):
MLFSGGQYSPVGRPEEVLLIYKIFLVIICFHVILVTSLKENGNSSLLSPSAESSLVSLIPYSNDAASEVL
STLNKTEKSKITIVKTFNASGVKSQRNICNLSSLCNDSVFFRGEIVFQHDEDHNVTQNQDTANGTFAGVL
SLSELKRSELNKTLQTLSETYFIVCATAEAQSTVNCTFTVKLNETMNVCAMMVTFQTVQIRPMEQCCCSP
RTPCPSSPEELEKLQCELQDPIVCLADQPHGPPLSSSSKPVVPQATIISHVASDFSLAEPLDHALMTPST
PSLTQESNLPSPQPTIPLASSPATDLPVQSVVVSSLPQTDLSHTLSPVQSSIPSPTTPAPSVPTELVTIS
TPPGETVVNTSTVSDLEAQVSQMEKALSLGSLEPNLAGEMVNRVSKLLHSPPALLAPLAQRLLKVVDAIG
LQLNFSSTTISLTSPSLALAVIRVNASNFNTTTFAAQDPTNLQVSLETPPPENSIGAITLPSSLMNNLPA
NDVELASRIQFNFFETPALFQDPSLENLTLISYVISSSVTNMTIKNLTRNVTVALKHINPSPDDLTVKCV
FWDLGRNGGKGGWSSDGCSVKDKRMNETICTCSHLTSFGILLDLSRTSLPPSQMMALTFITYIGCGLSSI
FLSVTLVTYIAFEKIRRDYPSKILIQLCAALLLLNLIFLLDSWIALYNTRGFCIAVAVFLHYFLLVSFTW
MGLEAFHMYLALVKVFNTYIRKYILKFCIVGWGIPAVVVSIVLTISPDNYGIGSYGKFPNGTPDDFCWIN
SNVVFYITVVGYFCVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGFAFF
AWGPVNVTFMYLFAIFNTLQGFFIFIFYCAAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQTVN
QGVSSSSNSLQSSCNSTNSTTLLVNSDCSVHASGNGNASTERNGVSFSVQNGDVCLHDLTGKQHMFSDKE
DSCNGKSRIALRRTSKRGSLHFIEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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