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Report for CCDS73418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73418.1 Public Homo sapiens 12 NINJ2 24 110 108 CCDS HistoryNCBI Gene:4815Re-query CCDS DB by CCDS ID:73418.1Re-query CCDS DB by GeneID:4815See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73418.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397265.7 ENSP00000380435.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397265.7Link to Ensembl Protein Viewer:ENSP00000380435.3Re-query CCDS DB by Nucleotide ID:ENST00000397265Re-query CCDS DB by Protein ID:ENSP00000380435
Original member Current member NCBI NM_001294345.2 NP_001281274.1 Accepted alive Link to Nucleotide Sequence:NM_001294345.2Link to Protein Sequence:NP_001281274.1Re-query CCDS DB by Nucleotide ID:NM_001294345Re-query CCDS DB by Protein ID:NP_001281274Link to BLAST:NP_001281274.1

Chromosomal Locations for CCDS 73418.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 565235 565401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 565950 566178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 610346 610357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGATGTATATGCCTGGAAGCTCCGACCCCAGGAGCCAGCCCATCAACCTGAACCATTACGCCACCAAGA
AGAGCGTGGCGGAGAGCATGCTGGACGTGGCCCTGTTCATGTCCAACGCCATGCGGCTGAAGGCGGTGCT
GGAGCAGGGACCATCCTCTCACTACTACACCACCCTGGTCACCCTCATCAGCCTCTCTCTGCTCCTGCAG
GTGGTCATCGGTGTCCTGCTCGTGGTCATTGCACGGCTGAACCTGAATGAGGTAGAAAAGCAGTGGCGAC
TCAACCAGCTCAACAACGCAGCCACCATCTTGGTCTTCTTCACTGTGGTCATCAATGTTTTCATTACAGC
CTTCGGGGCACATAAAACAGGGTTCCTGGCTGCCAGGGCCTCAAGGAATCCTCTCTGA

Translation (135 aa):
MMYMPGSSDPRSQPINLNHYATKKSVAESMLDVALFMSNAMRLKAVLEQGPSSHYYTTLVTLISLSLLLQ
VVIGVLLVVIARLNLNEVEKQWRLNQLNNAATILVFFTVVINVFITAFGAHKTGFLAARASRNPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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