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Report for CCDS73526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73526.1 Public Homo sapiens 12 RAD9B 24 110 108 CCDS HistoryNCBI Gene:144715Re-query CCDS DB by CCDS ID:73526.1Re-query CCDS DB by GeneID:144715See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73526.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409300.6 ENSP00000386434.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409300.6Link to Ensembl Protein Viewer:ENSP00000386434.1Re-query CCDS DB by Nucleotide ID:ENST00000409300Re-query CCDS DB by Protein ID:ENSP00000386434
Original member Current member NCBI NM_001286535.2 NP_001273464.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286535.2Link to Protein Sequence:NP_001273464.1Re-query CCDS DB by Nucleotide ID:NM_001286535Re-query CCDS DB by Protein ID:NP_001273464Link to BLAST:NP_001273464.1

Chromosomal Locations for CCDS 73526.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110502338 110502383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110503806 110503876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110505617 110505772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110506579 110506693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110512779 110512878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110515050 110515156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110518676 110518782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110518874 110518938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110519794 110519916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110522177 110522411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110530525 110530653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGGCAGCCATGCTGAAGTGCGTGATGAGCGGCAGTCAGGTGAAAGTATTTGGGAAAGCAGTTCAAGCTC
TATCACGAATTAGTGACGAGTTCTGGCTAGACCCATCTAAAAAAGGTCTTGCTCTAAGATGTGTGAATTC
TTCTCGGTCAGCATATGGATGTGTCCTGTTCTCTCCTGTGTTTTTTCAGCATTATCAATGGTCAGCTTTA
GTGAAAATGAGTGAAAATGAACTTGACACAACACTGCATTTAAAATGCAAATTGGGAATGAAGTCAATTT
TGCCCATCTTTAGATGTCTGAATTCCCTTGAAAGAAATATAGAGAAGTGCAGAATATTCACCAGATCTGA
TAAATGCAAAGTAGTTATTCAATTCTTCTACAGACATGGTATTAAAAGAACTCATAATATATGTTTTCAA
GAAAGTCAGCCTTTGCAAGTTATTTTTGACAAGAATGTTTGTACTAATACGCTAATGATTCAACCAAGAT
TGCTTGCTGATGCCATTGTTCTTTTTACATCAAGTCAAGAGGAAGTTACTCTTGCTGTTACTCCACTGAA
TTTTTGCCTCAAGAGTTCTAATGAGGAATCAATGGATTTGAGCAATGCTGTACACAGTGAGATGTTTGTT
GGCTCAGATGAGTTTGACTTCTTTCAAATTGGAATGGACACTGAGATAACATTTTGTTTCAAAGAATTGA
AGGGAATACTGACATTTTCAGAAGCTACACATGCTCCTATATCCATTTATTTTGATTTCCCTGGGAAACC
TCTGGCTTTGAGTATTGATGATATGTTAGTGGAAGCTAACTTTATTTTGGCCACATTAGCTGATGAACAA
AGTAGAGCATCTTCACCACAGTCACTGTGTCTTTCACAGAAACGAAAAAGGTCAGATCTGATTGAAAAAA
AGGCTGGCAAAAATGTAACTGGCCAGGCCCTGGAATGTATTTCAAAAAAAGCAGCACCAAGAAGGCTTTA
TCCTAAGGAGACTCTCACAAACATATCTGCATTGGAAAACTGTGGCAGCCCTGCAATGAAAAGAGTGGAT
GGAGATGTCAGTGAAGTATCAGAAAGCAGTGTCAGCAACACAGAGGAAGTGCCAGGGTCTCTGTGTCTCA
GAAAGTTTTCTTGCATGTTCTTTGGAGCAGTTTCTTCTGACCAGCAAGAACACTTCAACCACCCTTTCGA
CAGTCTGGCAAGAGCAAGTGACAGTGAAGAGGACATGAATAATGGCAGTTTCTCTATATTCTAA

Translation (417 aa):
MAAMLKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQHYQWSAL
VKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIFTRSDKCKVVIQFFYRHGIKRTHNICFQ
ESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVTLAVTPLNFCLKSSNEESMDLSNAVHSEMFV
GSDEFDFFQIGMDTEITFCFKELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQ
SRASSPQSLCLSQKRKRSDLIEKKAGKNVTGQALECISKKAAPRRLYPKETLTNISALENCGSPAMKRVD
GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMNNGSFSIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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