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Report for CCDS73609.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73609.1 Public Homo sapiens 14 POTEM 24 110 108 CCDS HistoryNCBI Gene:641455Re-query CCDS DB by CCDS ID:73609.1Re-query CCDS DB by GeneID:641455See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 73609.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000547889.6 ENSP00000448062.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000547889.6Link to Ensembl Protein Viewer:ENSP00000448062.2Re-query CCDS DB by Nucleotide ID:ENST00000547889Re-query CCDS DB by Protein ID:ENSP00000448062
Original member Current member NCBI NM_001145442.1 NP_001138914.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145442.1Link to Protein Sequence:NP_001138914.1Re-query CCDS DB by Nucleotide ID:NM_001145442Re-query CCDS DB by Protein ID:NP_001138914Link to BLAST:NP_001138914.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138914.1 508 A6NI47 508 100% 0 0

Chromosomal Locations for CCDS 73609.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 18967486 18968006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18972760 18972874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18973034 18973207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18976049 18976155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18977466 18977603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18980074 18980144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18985411 18985481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18987169 18987213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18988255 18988421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 18997041 18997158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGTGGCTGAGGCTGGTTCAATGCCGGCTGCCTCCTCTGTGAAGAAGCCATTTGGTCTCAGAAGCAAGA
TGGGCAAGTGGTGCCGCCACTGCTTCCCCTGGTGCAGGGGGAGCGGCAAGAGCAACGTGGGCACTTCTGG
AGACCACGATGATTCTGCTATGAAGACACTCAGGAGCAAGATGGGCAAGTGGTGCCGCCACTGCTTCCCC
TGGTGCAGGGGGAGCGGCAAGAGCAACGTGGGCACTTCTGGAGACCACGACGACTCTGCTATGAAGACAC
TCAGGAGCAAGATGGGCAAGTGGTGCTGCCACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAGCAAAGT
GGGCCCCTGGGGAGACTACGACGACAGCGCTTTCATGGAGCCGAGGTACCACGTCCGTCGAGAAGATCTG
GACAAGCTCCACAGAGCTGCCTGGTGGGGTAAAGTCCCCAGAAAGGATCTCATCGTCATGCTCAAGGACA
CTGACATGAACAAGAAGGACAAGCAAAAGAGGACTGCTCTACATCTGGCCTCTGCCAATGGAAATTCAGA
AGTAGTAAAACTCCTGCTGGACAGACGATGTCAACTTAATATCCTTGACAACAAAAAGAGGACAGCTCTG
ACAAAGGCCGTACAATGCCAGGAAGATGAATGTGCGTTAATGTTGCTGGAACATGGCACTGATCCGAATA
TTCCAGATGAGTATGGAAATACCGCTCTACACTATGCTATCTACAATGAAGATAAATTAATGGCCAAAGC
ACTGCTCTTATACGGTGCTGATATCGAATCAAAAAACAAGCATGGCCTCACACCACTGTTACTTGGTGTA
CATGAGCAAAAACAGCAAGTGGTGAAATTCTTAATCAAGAAAAAAGCAAATTTAAATGCACTGGATAGAT
ATGGAAGAACTGTTCTCATACTTGCTGTATGTTGTGGATCGGCAAGTATAGTCAGCCTTCTACTTGAGCA
AAACATTGATGTATCTTCTCAAGATCTATCTGGACAGACGGCCAGAGAGTATGCTGTTTCTAGTCGTCAT
AATGTAATTTGCCAGTTACTTTCTGACTACAAAGAAAAACAGATACTAAAAGTCTCTTCTGAAAACAGCA
ATCCAGAACAAGACTTAAAGCTGACATCAGAGGAAGAGTCACAAAGGCTTAAAGGAAGTGAAAATAGCCA
GCCAGAGGAAATGTCTCAAGAACCAGAAATAAATAAGGGTGGTGATAGAAAGGTTGAAGAAGAAATGAAG
AAGCACGGAAGTACTCATATGGGATTCCCAGAAAACCTGCCTAACGGTGCCACTGCTGACAATGGTGATG
ATGGATTAATTCCACCAAGGAAAAGCAGAACACCTGAAAGCCAGCAATTTCCTGACACTGAGAATGAACA
GTATCACAGTGATGAACAAAATGATACTCAGAAGCAACTTTCTGAAGAACAGAACACTGGAATATTACAA
GATGAGATTCTGATTCATGAAGAAAAGCAGATAGAAGTGGCTGAAAATGAATTCTGA

Translation (508 aa):
MVAEAGSMPAASSVKKPFGLRSKMGKWCRHCFPWCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCRHCFP
WCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSKVGPWGDYDDSAFMEPRYHVRREDL
DKLHRAAWWGKVPRKDLIVMLKDTDMNKKDKQKRTALHLASANGNSEVVKLLLDRRCQLNILDNKKRTAL
TKAVQCQEDECALMLLEHGTDPNIPDEYGNTALHYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGV
HEQKQQVVKFLIKKKANLNALDRYGRTVLILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSRH
NVICQLLSDYKEKQILKVSSENSNPEQDLKLTSEEESQRLKGSENSQPEEMSQEPEINKGGDRKVEEEMK
KHGSTHMGFPENLPNGATADNGDDGLIPPRKSRTPESQQFPDTENEQYHSDEQNDTQKQLSEEQNTGILQ
DEILIHEEKQIEVAENEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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