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Report for CCDS73724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73724.1 Public Homo sapiens 15 GALK2 24 110 108 CCDS HistoryNCBI Gene:2585Re-query CCDS DB by CCDS ID:73724.1Re-query CCDS DB by GeneID:2585See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73724.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396509.6 ENSP00000379766.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396509.6Link to Ensembl Protein Viewer:ENSP00000379766.2Re-query CCDS DB by Nucleotide ID:ENST00000396509Re-query CCDS DB by Protein ID:ENSP00000379766
Original member Current member EBI ENST00000544523.5 ENSP00000440312.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544523.5Link to Ensembl Protein Viewer:ENSP00000440312.1Re-query CCDS DB by Nucleotide ID:ENST00000544523Re-query CCDS DB by Protein ID:ENSP00000440312
Original member Current member EBI ENST00000559454.5 ENSP00000453133.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559454.5Link to Ensembl Protein Viewer:ENSP00000453133.1Re-query CCDS DB by Nucleotide ID:ENST00000559454Re-query CCDS DB by Protein ID:ENSP00000453133
Original member Current member NCBI NM_001289030.2 NP_001275959.1 Accepted alive Link to Nucleotide Sequence:NM_001289030.2Link to Protein Sequence:NP_001275959.1Re-query CCDS DB by Nucleotide ID:NM_001289030Re-query CCDS DB by Protein ID:NP_001275959Link to BLAST:NP_001275959.1
Original member Current member NCBI NM_001289031.1 NP_001275960.1 Accepted alive Link to Nucleotide Sequence:NM_001289031.1Link to Protein Sequence:NP_001275960.1Re-query CCDS DB by Nucleotide ID:NM_001289031Re-query CCDS DB by Protein ID:NP_001275960Link to BLAST:NP_001275960.1

Chromosomal Locations for CCDS 73724.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 49201181 49201250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49217190 49217313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49235851 49235941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49239221 49239367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49281987 49282085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49283566 49283718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49292327 49292537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49319604 49319805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49327952 49328159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGTTTAACTCCAAGTTTGGATCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAG
GAGAGCATATAGATTATTGTGGATATTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGT
AGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGT
GCTAATAACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAA
TTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAG
TTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGG
AATCTATCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAG
GCATGGACCAGTCTATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAG
GGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAG
GCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACA
AAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGA
AATGCTGTTGGTCACAGAAGATGCCCTTCATCCTGAACCCTATAACCCTGAGGAGATCTGCAGGTGTCTG
GGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTCAAAC
TCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGA
AGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATG
TATGAGTGCAGCTGCCCCGAGCTGGATCAGCTGGTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCAC
GACTTACTGGAGCAGGATGGGGAGGCTGCACAGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCT
AGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTT
GCTACCAAACCTGGAGGTGGGGCTTTGGTTTTGCTTGAGGCCTGA

Translation (434 aa):
MFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTS
ANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGR
NLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNK
AATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCL
GISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDM
YECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLF
ATKPGGGALVLLEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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