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Report for CCDS73818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73818.1 Public Homo sapiens 16 HMOX2 24 110 108 CCDS HistoryNCBI Gene:3163Re-query CCDS DB by CCDS ID:73818.1Re-query CCDS DB by GeneID:3163See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613539.1 ENSP00000477572.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613539.1Link to Ensembl Protein Viewer:ENSP00000477572.1Re-query CCDS DB by Nucleotide ID:ENST00000613539Re-query CCDS DB by Protein ID:ENSP00000477572
Original member Current member NCBI NM_001286267.2 NP_001273196.1 Accepted alive Link to Nucleotide Sequence:NM_001286267.2Link to Protein Sequence:NP_001273196.1Re-query CCDS DB by Nucleotide ID:NM_001286267Re-query CCDS DB by Protein ID:NP_001273196Link to BLAST:NP_001273196.1

Chromosomal Locations for CCDS 73818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4496146 4496266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4505484 4505610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4506895 4507012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4507713 4508204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4509412 4509538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4509629 4509756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGATCAGTCTAGCTCATTGCAGCCTCCACCTCC
TGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGATTACAGGACCAGAGGAGCGAGAGCA
GCAAGAACCACACCCAGCAGCAATGTCAGCGGAAGTGGAAACCTCAGAGGGGGTAGACGAGTCAGAAAAA
AAGAACTCTGGGGCCCTAGAAAAGGAGAACCAAATGAGAATGGCTGACCTCTCGGAGCTCCTGAAGGAAG
GGACCAAGGAAGCACACGACCGGGCAGAAAACACCCAGTTTGTCAAGGACTTCTTGAAAGGCAACATTAA
GAAGGAGCTGTTTAAGCTGGCCACCACGGCACTTTACTTCACATACTCAGCCCTCGAGGAGGAAATGGAG
CGCAACAAGGACCATCCAGCCTTTGCCCCTTTGTACTTCCCCATGGAGCTGCACCGGAAGGAGGCGCTGA
CCAAGGACATGGAGTATTTCTTTGGTGAAAACTGGGAGGAGCAGGTGCAGTGCCCCAAGGCTGCCCAGAA
GTACGTGGAGCGGATCCACTACATAGGGCAGAACGAGCCGGAGCTACTGGTGGCCCATGCATACACCCGC
TACATGGGGGATCTCTCGGGGGGCCAGGTGCTGAAGAAGGTGGCCCAGCGAGCACTGAAACTCCCCAGCA
CAGGGGAAGGGACCCAGTTCTACCTGTTTGAGAATGTGGACAATGCCCAGCAGTTCAAGCAGCTCTACCG
GGCCAGGATGAACGCCCTGGACCTGAACATGAAGACCAAAGAGAGGATCGTGGAGGAGGCCAACAAGGCT
TTTGAGTATAACATGCAGATATTCAATGAACTGGACCAGGCCGGCTCCACACTGGCCAGAGAGACCTTGG
AGGATGGGTTCCCTGTACACGATGGGAAAGGAGACATGCGTAAATGCCCTTTCTACGCTGCTGAACAAGA
CAAAGGTGCCCTGGAGGGCAGCAGCTGTCCCTTCCGAACAGCTATGGCTGTGCTGAGGAAGCCCAGCCTC
CAGTTCATCCTGGCCGCTGGTGTGGCCCTAGCTGCTGGACTCTTGGCCTGGTACTACATGTGA

Translation (370 aa):
MESRSVAQAGVQWISLAHCSLHLLGSRDSPASASCVAGITGPEEREQQEPHPAAMSAEVETSEGVDESEK
KNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEME
RNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTR
YMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKA
FEYNMQIFNELDQAGSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSL
QFILAAGVALAAGLLAWYYM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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