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Report for CCDS73820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73820.1 Public Homo sapiens 16 ANKS3 24 110 108 CCDS HistoryNCBI Gene:124401Re-query CCDS DB by CCDS ID:73820.1Re-query CCDS DB by GeneID:124401See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450067.6 ENSP00000388270.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450067.6Link to Ensembl Protein Viewer:ENSP00000388270.3Re-query CCDS DB by Nucleotide ID:ENST00000450067Re-query CCDS DB by Protein ID:ENSP00000388270
Original member Current member NCBI NM_001242929.2 NP_001229858.1 Accepted alive Link to Nucleotide Sequence:NM_001242929.2Link to Protein Sequence:NP_001229858.1Re-query CCDS DB by Nucleotide ID:NM_001242929Re-query CCDS DB by Protein ID:NP_001229858Link to BLAST:NP_001229858.1

Chromosomal Locations for CCDS 73820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4697028 4697104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4697333 4697416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4697977 4698062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4698427 4698599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4698800 4698941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4699052 4699176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4700970 4701134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4701434 4701543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4702102 4702242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4705095 4705253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4714051 4714186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4724750 4724831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4729980 4730149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1650 nt):
ATGTCCGAGCTCAGCGATGAAGCCAGCGAGCCGGAACTCCTGAACCGCAGCTTGTCCATGTGGCACGGGC
TCGGGACACAGGTCAGCGGGGAGGAGCTGGATGTCCCCCTGGATCTTCACACAGCTGCTTCCATTGGCCA
GTATGAAGTGGTGAAGGAGTGTGTGCAGCGGGAGCCGATATGTGGATTTACTCCCTTGATGGAAGCAGCT
GCTGCTGGCCATGAGATAATCGTGCAGTATTTTCTGAATCACGGAGTCAAGGTGGACGCGAGAGACCACA
GTGGAGCCACAGCCCGGATGCTGGCCAAGCAGTACGGACACATGAAGATCGTGGCCTTGATGGACACTTA
CTCGCCCTCTCTGCCCAAGAGCCTCTATCGGAGCCCAGAAAAGTACGAAGATCTGAGCTCTTCTGACGAG
TCCTGCCCTGCTCCTCAGAGACAGAGGCCTTGCCGGAAGAAGGGTGTCAGCATCCACGAGGGACCGCGAG
CCCTGGCCAGGATCACAGGCATTGGCCTGGGCGGCAGAGCCCCACGGCCTCGCTATGAGCAGGCTCCTCC
CCGTGGCTATGTCACCTTCAACAGCAGTGGCGAGAACCCCCTGGAAGAAGAGGGCCTCTGCTGCCGGGAT
GTCACCTCCCCCATCAATGAGCGGGATGTGGAGAGCAGCAGCAGCAGCAGCAGTCGGGAGGAACATGCTT
TCTGTGCCAACCTGGGGCCCGTCCAGAGCAGCAGCAGCAGCGAGGGCCTGGCCAGAGCCCAGGGGCTCAG
CAGCGAAGCTTCTGTGGAGAGCAACGAGGACTCGGATCATGCCTGTAAAAGCTCAGCTCGCAAACAAGCT
AAAAGTTACATGAAGACCAAGAATCCTGACAGCCAGTGGCCTCCCCGCGCTGCAACTGACAGGGAAGGCT
TTCTCGCTGAGTCCAGCCCCCAGACTCAGAGGGCCCCCTACTCAGGACCCCAGGACCTTGCCGCACTGCT
GGAGCAGATCGGGTGTCTGAAGTACCTGCAGGTGTTTGAGGAGCAGGACGTGGACCTCCGCATCTTTCTG
ACCCTCACTGAGAGCGACCTGAAGGAAATTGGCATCACGCTGTTTGGGCCCAAGAGGAAGATGACGTCCG
CCATTGCCCGCTGGCACAGCAGTGCCCGCCCACCCGGGGATGCCCTGGAGCTGGCCTACGCCGACCGGCT
GGAGGCTGAGATGCAGGAGCTCGCCATCCAGCTGCACAAGCGCTGCGAGGAGGTAGAGGCCACGCGGGGC
CAGGTGTGTCAGGAGCAGGAGCTGCGCGCCGTGGTGGAGAGCTGCCTGCTGGAGCAGGACCGCGCCCGCG
AGGACCTCCAGGCCCGGCTGCGGGAGACGTGGGCCCTGGCCCGGGATGCTGCCCTCGTCCTGGACCAGCT
GCGAGCCTGTCAAGCTGAGCTGTCATCTCGAGTGAGGCAGGACCAGCCCCCTGGTGCAGCCACTCTGGGC
CTAGCCGTCCCCCCAGCTGACTCCAAGGGCTGGCAAGCGTCCCTGCAGGCCATGAGCCTCCCCGAGCTCT
CGGGAGCCCTGGAGGACCGTGTCCGTGAGATGGGGCAAGCACTGTGCTTAGTGACCCAGAGCCTGGAGAA
GCTGCAGGTGCTGAACGGGAAGAAGTGGCGGGAGACCTAG

Translation (549 aa):
MSELSDEASEPELLNRSLSMWHGLGTQVSGEELDVPLDLHTAASIGQYEVVKECVQREPICGFTPLMEAA
AAGHEIIVQYFLNHGVKVDARDHSGATARMLAKQYGHMKIVALMDTYSPSLPKSLYRSPEKYEDLSSSDE
SCPAPQRQRPCRKKGVSIHEGPRALARITGIGLGGRAPRPRYEQAPPRGYVTFNSSGENPLEEEGLCCRD
VTSPINERDVESSSSSSSREEHAFCANLGPVQSSSSSEGLARAQGLSSEASVESNEDSDHACKSSARKQA
KSYMKTKNPDSQWPPRAATDREGFLAESSPQTQRAPYSGPQDLAALLEQIGCLKYLQVFEEQDVDLRIFL
TLTESDLKEIGITLFGPKRKMTSAIARWHSSARPPGDALELAYADRLEAEMQELAIQLHKRCEEVEATRG
QVCQEQELRAVVESCLLEQDRAREDLQARLRETWALARDAALVLDQLRACQAELSSRVRQDQPPGAATLG
LAVPPADSKGWQASLQAMSLPELSGALEDRVREMGQALCLVTQSLEKLQVLNGKKWRET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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