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Report for CCDS73868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73868.1 Public Homo sapiens 16 ZNF48 24 110 108 CCDS HistoryNCBI Gene:197407Re-query CCDS DB by CCDS ID:73868.1Re-query CCDS DB by GeneID:197407See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73868.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622647.3 ENSP00000479658.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622647.3Link to Ensembl Protein Viewer:ENSP00000479658.1Re-query CCDS DB by Nucleotide ID:ENST00000622647Re-query CCDS DB by Protein ID:ENSP00000479658
Original member Current member NCBI NM_001214907.1 NP_001201836.1 Accepted alive Link to Nucleotide Sequence:NM_001214907.1Link to Protein Sequence:NP_001201836.1Re-query CCDS DB by Nucleotide ID:NM_001214907Re-query CCDS DB by Protein ID:NP_001201836Link to BLAST:NP_001201836.1
Original member Current member NCBI NM_001324494.2 NP_001311423.1 Accepted alive Link to Nucleotide Sequence:NM_001324494.2Link to Protein Sequence:NP_001311423.1Re-query CCDS DB by Nucleotide ID:NM_001324494Re-query CCDS DB by Protein ID:NP_001311423Link to BLAST:NP_001311423.1

Chromosomal Locations for CCDS 73868.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30397620 30399107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGTCAGATCTGGTGAAACACCAGCGGACCCACACAGGGGAGAAACCCTACAAGTGTGGGGTCTGTGGCA
AGGGCTTTGGGGATAGCTCTGCCCGGATCAAACACCAGCGGACTCATAGTGGGGAGAAGCCCTATAGAGC
CCGGCCACCAGCCCAGGGTCCCCCAAAGATTCCTCGGTCCCGGATCCCTGCTGGTGAGCGCCCCACTATC
TGTGGTGAATGTGGCAAGAGCTTCCGGCAGAGTTCTGACCTGGTGAAACACCAGCGGACACACACTGGTG
AGAAGCCCTACAAGTGTGGCATATGTGGCAAGGGCTTTGGCGACAGTTCCGCCCGCATCAAGCACCAGCG
GACACACCGGGGGGAGCAGCCCCCCCGACCAGTGGTGCCCCGACGGCAGCCATCTCGGGCAGCCACGGCA
GCTACCCAGGGACCGAAGGCCCAGGACAAGCCATATATCTGCACTGATTGCGGCAAGAGGTTTGTGCTCA
GCTGCAGCCTCCTGAGTCACCAGCGTAGTCACTTGGGGCCCAAGCCCTTTGGCTGTGATGTGTGTGGAAA
GGAGTTTGCCCGGGGATCCGACCTGGTGAAGCACCTGCGGGTGCACACGGGTGAGAAGCCCTACCTCTGC
CCAGAGTGCGGCAAAGGTTTCGCGGACAGCTCCGCCCGAGTCAAACACCTCCGCACCCACAGTGGCGAGA
GGCCCCATGCCTGCCCGGAATGCGACCGTACCTTCAGCCTCAGCTCCACCCTTCTTCGCCACCGCCTCAC
TCACATGGAGCCCCAGGACTTCAGCTTCCCAGGCTATCCCCTACCCGCTCTGATCCCCAGCCCACCCCCA
CCTCCTCTGGGCACCAGCCCCCCGCTGACACCTCGAAGTCCCTCACACTCGGGTGAGCCTTTTGGCCTGC
CTGGCTTGGAGCCAGAGCCTGGGGGCCCACAGGCTGGGGAGCCACCCCCACCACTGGCGGGCGACAAGCC
CCACAAGTGCCCTGAGTGTGGCAAGGGCTTCCGCCGAAGCTCTGACCTGGTGAAACACCATCGTGTGCAC
ACAGGGGAGAAACCCTACCTCTGTCCTGAATGCGGCAAGGGTTTTGCTGACAGCTCAGCCCGAGTCAAGC
ACCTCCGCACCCACCGTGGTGAACGGGCCCGGCCACCACCACCATCCACTCTGCTGCGGCCACATAACCC
ACCTGGCCCAGTACCCATGGCCCCTCGACCCCGAGTTCGGGCCCAGCCTTCTGGACCCAGCCAGCCCCAC
GTGTGTGGCTTCTGTGGGAAGGAGTTCCCCCGGAGCTCAGATCTGGTCAAACACAGGCGTACACACACGG
GGGAGAAGCCATACAAGTGTGCAGAGTGTGGCAAGGGTTTTGGTGACAGTTCTGCCCGCATCAAGCACCA
GCGTGGGCACCTGGTCCTGACGCCCTTTGGGATAGGGGATGGTAGGGCAAGGCCCCTCAAGCAGGAGGCA
GCAACAGGACTGGAATGA

Translation (495 aa):
MSDLVKHQRTHTGEKPYKCGVCGKGFGDSSARIKHQRTHSGEKPYRARPPAQGPPKIPRSRIPAGERPTI
CGECGKSFRQSSDLVKHQRTHTGEKPYKCGICGKGFGDSSARIKHQRTHRGEQPPRPVVPRRQPSRAATA
ATQGPKAQDKPYICTDCGKRFVLSCSLLSHQRSHLGPKPFGCDVCGKEFARGSDLVKHLRVHTGEKPYLC
PECGKGFADSSARVKHLRTHSGERPHACPECDRTFSLSSTLLRHRLTHMEPQDFSFPGYPLPALIPSPPP
PPLGTSPPLTPRSPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKHHRVH
TGEKPYLCPECGKGFADSSARVKHLRTHRGERARPPPPSTLLRPHNPPGPVPMAPRPRVRAQPSGPSQPH
VCGFCGKEFPRSSDLVKHRRTHTGEKPYKCAECGKGFGDSSARIKHQRGHLVLTPFGIGDGRARPLKQEA
ATGLE


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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