NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73903.1 Public Homo sapiens 16 TSNAXIP1 24 110 108 CCDS HistoryNCBI Gene:55815Re-query CCDS DB by CCDS ID:73903.1Re-query CCDS DB by GeneID:55815See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73903.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561639.6 ENSP00000457241.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000561639.6Link to Ensembl Protein Viewer:ENSP00000457241.1Re-query CCDS DB by Nucleotide ID:ENST00000561639Re-query CCDS DB by Protein ID:ENSP00000457241
Original member Current member NCBI NM_001288990.3 NP_001275919.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001288990.3Link to Protein Sequence:NP_001275919.1Re-query CCDS DB by Nucleotide ID:NM_001288990Re-query CCDS DB by Protein ID:NP_001275919Link to BLAST:NP_001275919.1

Chromosomal Locations for CCDS 73903.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67807150 67807196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67814302 67814401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67820839 67820951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67821099 67821225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67823626 67823719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67824583 67824779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825137 67825272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825667 67825836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825917 67826076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826152 67826282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826437 67826562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826692 67826844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826963 67827072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827249 67827375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827473 67827579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827753 67827993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2139 nt):
ATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGATTACAGCCACGGCCTTCAGGAG
TGACCATAGACGAATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAAG
GACGCTGACTGGTCAGTTCTCCATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACC
ATTTTGCAAAATCGAAAACCCTGTTCAGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCT
TTCGCACTGCCAAGCCCCAGTACTTGGAGGAACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGA
CCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAG
GACTTCAAAACGTACAAGCCATTACTATCCTCCATCAAGAATGCGTATGAGGGGATGCTGGCCCACCAAA
GGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGAGAG
GATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGAACTTGCTA
AAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAAGAACT
TGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAATGA
GCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAGGACCCTGTGAAG
TTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGAAGG
CCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTCAGGA
GCAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCAC
ATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGC
GGCCTGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGG
CAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGAC
TTCTTCCCTGGTCTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACA
AGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCA
GAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCC
TGGGCTTATACTATTTTTGAAAATATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAG
TCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGA
GATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGT
ACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCA
GCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGT
GCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGC
ATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGG
ACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGAGGG
TGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATC
AGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAG

Translation (712 aa):
MACQQSRYHSFSSASRLQPRPSGVTIDESFLTEDKSTQNRKLLQKRRTLTGQFSMGGHLSPWPTYTSGQT
ILQNRKPCSDDYRKRVGSCQQHPFRTAKPQYLEELENYLRKELLLLDLGTDSTQELRLQPYREIFEFFIE
DFKTYKPLLSSIKNAYEGMLAHQREKIRALEPLKAKLVTVNEDCNERILAMRAEEKYEISLLKKEKMNLL
KLIDKKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQREDMSLAQSPGIWGEDPVK
LTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLDTLRASYEEVRKEHEILMQLH
MSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLVDVLLEEIGSGLLREKD
FFPGLGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETFPDFFFNFLEHRFGPSDAMA
WAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQNEGLLTMEQFNTVLKS
TFPLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMEDEEGQSEPFVQKLWEQYMDEKDEYLQQLKQELG
IELHEEVTLPKLRGGLMTIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVIDI
RRVGPREPEPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH