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Report for CCDS73922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73922.1 Public Homo sapiens 16 FBXO31 24 110 108 CCDS HistoryNCBI Gene:79791Re-query CCDS DB by CCDS ID:73922.1Re-query CCDS DB by GeneID:79791See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618298.6 ENSP00000479703.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618298.6Link to Ensembl Protein Viewer:ENSP00000479703.1Re-query CCDS DB by Nucleotide ID:ENST00000618298Re-query CCDS DB by Protein ID:ENSP00000479703
Original member Current member NCBI NM_001282683.2 NP_001269612.1 Accepted alive Link to Nucleotide Sequence:NM_001282683.2Link to Protein Sequence:NP_001269612.1Re-query CCDS DB by Nucleotide ID:NM_001282683Re-query CCDS DB by Protein ID:NP_001269612Link to BLAST:NP_001269612.1

Chromosomal Locations for CCDS 73922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 87331288 87331510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87333886 87334286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87335304 87335457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87336155 87336264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87342877 87342951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87343598 87343738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGTACCTGCCTCCCCATGACCCCCACGTCGATGACCCTATGAGATTCAAGCCTCTGTTCAGGATCCACC
TGATGGAGAGGAAGGCTGCCACAGTGGAGTGCATGTACGGCCACAAAGGGCCCCACCACGGCCACATCCA
GATTGTGAAGAAGGATGAGTTCTCCACCAAGTGCAACCAGACGGACCACCACAGGATGTCCGGCGGGAGG
CAGGAGGAGTTTCGGACGTGGCTGAGGGAGGAATGGGGGCGCACGCTGGAGGACATCTTCCACGAGCACA
TGCAGGAGCTCATCCTGATGAAGTTCATCTACACCAGTCAGTACGACAACTGCCTGACCTACCGCCGCAT
CTACCTGCCGCCCAGCCGCCCCGACGACCTCATCAAGCCTGGCCTCTTCAAAGGTACCTATGGCAGCCAC
GGCCTGGAGATTGTGATGCTCAGCTTCCACGGCCGGCGTGCCAGGGGCACCAAGATCACGGGCGACCCCA
ACATCCCCGCTGGGCAGCAGACAGTGGAGATCGACCTGAGGCATCGGATCCAGCTGCCCGACCTCGAGAA
CCAGCGCAACTTCAATGAGCTCTCCCGCATCGTCCTGGAGGTGCGCGAGAGGGTGCGCCAGGAGCAGCAG
GAAGGCGGGCACGAGGCGGGCGAGGGTCGTGGCCGGCAGGGCCCCCGGGAGTCCCAGCCAAGCCCTGCCC
AGCCCAGGGCAGAGGCGCCCAGCAAGGGCCCAGATGGGACACCTGGTGAGGATGGTGGCGAGCCTGGGGA
TGCCGTAGCTGCGGCCGAGCAGCCTGCCCAGTGTGGGCAGGGGCAGCCGTTCGTGCTGCCCGTGGGCGTG
AGCTCCAGGAATGAGGACTACCCCCGAACCTGCAGGATGTGTTTTTATGGCACAGGCCTCATCGCGGGCC
ACGGCTTCACCAGCCCTGAACGCACCCCCGGGGTCTTCATCCTCTTCGATGAGGACCGCTTCGGGTTCGT
CTGGCTGGAGCTGAAATCCTTCAGCCTGTACAGCCGGGTCCAGGCCACCTTCCGGAACGCAGATGCGCCG
TCCCCACAGGCCTTCGATGAGATGCTCAAGAACATTCAGTCCCTCACCTCCTGA

Translation (367 aa):
MYLPPHDPHVDDPMRFKPLFRIHLMERKAATVECMYGHKGPHHGHIQIVKKDEFSTKCNQTDHHRMSGGR
QEEFRTWLREEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSRPDDLIKPGLFKGTYGSH
GLEIVMLSFHGRRARGTKITGDPNIPAGQQTVEIDLRHRIQLPDLENQRNFNELSRIVLEVRERVRQEQQ
EGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQPAQCGQGQPFVLPVGV
SSRNEDYPRTCRMCFYGTGLIAGHGFTSPERTPGVFILFDEDRFGFVWLELKSFSLYSRVQATFRNADAP
SPQAFDEMLKNIQSLTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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