NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74025.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74025.1 Public Homo sapiens 17 NSRP1 24 110 108 CCDS HistoryNCBI Gene:84081Re-query CCDS DB by CCDS ID:74025.1Re-query CCDS DB by GeneID:84081See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74025.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000612959.4 ENSP00000477862.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612959.4Link to Ensembl Protein Viewer:ENSP00000477862.1Re-query CCDS DB by Nucleotide ID:ENST00000612959Re-query CCDS DB by Protein ID:ENSP00000477862
Original member Current member NCBI NM_001261467.2 NP_001248396.1 Accepted alive Link to Nucleotide Sequence:NM_001261467.2Link to Protein Sequence:NP_001248396.1Re-query CCDS DB by Nucleotide ID:NM_001261467Re-query CCDS DB by Protein ID:NP_001248396Link to BLAST:NP_001248396.1

Chromosomal Locations for CCDS 74025.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30172590 30172598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30178071 30178199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30179090 30179297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30180908 30181016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30184615 30185674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGAAACAGACCAAACTGGAAATCCAGAAGGCCCTTGCAGAAGATGCTACTGTGTATGAATATGACAGTA
TTTATGATGAAATGCAGAAAAAAAAGGAGGAAAATAATCCCAAATTGCTTTTGGGGAAAGACAGAAAGCC
CAAGTATATTCACAACTTGCTAAAAGCAGTTGAGATCAGAAAAAAGGAACAGGAAAAAAGAATGGAAAAG
AAAATACAGAGAGAACGAGAAATGGAAAAGGGGGAGTTTGATGATAAAGAAGCATTTGTGACATCTGCAT
ATAAGAAAAAACTGCAAGAGAGAGCTGAAGAAGAAGAAAGAGAAAAGAGGGCTGCTGCACTGGAAGCATG
TTTGGATGTAACCAAGCAGAAAGATCTCAGTGGATTTTATAGGCACCTATTAAATCAAGCAGTTGGTGAA
GAGGAAGTACCTAAATGCAGCTTTCGTGAAGCCAGATCTGGTATAAAGGAAGAAAAATCAAGGGGCTTCT
CCAATGAAGTAAGTTCAAAAAACAGAATACCACAAGAGAAATGCATTCTTCAAACTGATGTGAAAGTAGA
GGAAAACCCAGATGCAGACAGTGACTTCGATGCTAAGAGCAGTGCGGATGATGAAATAGAAGAAACTAGA
GTGAACTGCAGAAGGGAAAAGGTCATAGAGACCCCTGAGAATGACTTCAAGCACCACAGGAGTCAAAACC
ACTCTCGGTCACCTAGTGAAGAAAGAGGGCACAGTACCAGGCACCACACGAAAGGATCACGAACGTCGAG
AGGACATGAGAAAAGGGAAGATCAGCACCAGCAGAAGCAATCCAGAGACCAAGAGAACCATTACACTGAC
CGTGATTACCGGAAAGAAAGGGATTCTCATAGGCACAGAGAGGCCAGTCATAGAGATTCCCATTGGAAGA
GGCATGAACAGGAAGATAAACCAAGGGCGAGGGACCAAAGAGAAAGAAGTGACAGAGTATGGAAAAGGGA
GAAAGATAGGGAGAAATATTCCCAAAGAGAACAAGAAAGAGATAGACAACAAAATGATCAGAACCGACCC
AGTGAGAAAGGAGAGAAGGAAGAGAAAAGCAAAGCAAAGGAAGAGCATATGAAAGTAAGGAAGGAAAGAT
ATGAAAATAATGATAAATACAGAGATAGAGAAAAACGAGAGGTAGGTGTTCAGTCTTCAGAAAGAAATCA
AGACAGAAAGGAAAGCAGCCCAAATTCTAGGGCAAAGGATAAATTTCTTGACCAAGAAAGATCCAACAAA
ATGAGAAACATGGCAAAGGACAAAGAAAGAAACCAAGAGAAACCCTCTAATTCTGAATCATCACTGGGAG
CAAAACACAGACTCACAGAGGAAGGGCAAGAGAAGGGTAAAGAACAAGAGAGACCACCTGAGGCAGTGAG
CAAGTTTGCAAAGCGGAACAATGAAGAAACTGTAATGTCAGCTAGAGACAGGTACTTGGCCAGGCAGATG
GCGCGGGTTAATGCAAAGACCTATATTGAGAAAGAAGATGATTGA

Translation (504 aa):
MKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEK
KIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACLDVTKQKDLSGFYRHLLNQAVGE
EEVPKCSFREARSGIKEEKSRGFSNEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDEIEETR
VNCRREKVIETPENDFKHHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTD
RDYRKERDSHRHREASHRDSHWKRHEQEDKPRARDQRERSDRVWKREKDREKYSQREQERDRQQNDQNRP
SEKGEKEEKSKAKEEHMKVRKERYENNDKYRDREKREVGVQSSERNQDRKESSPNSRAKDKFLDQERSNK
MRNMAKDKERNQEKPSNSESSLGAKHRLTEEGQEKGKEQERPPEAVSKFAKRNNEETVMSARDRYLARQM
ARVNAKTYIEKEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH