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Report for CCDS74047.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74047.1 Public Homo sapiens 17 MRPL45 24 110 108 CCDS HistoryNCBI Gene:84311Re-query CCDS DB by CCDS ID:74047.1Re-query CCDS DB by GeneID:84311See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74047.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619548.1 ENSP00000478397.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619548.1Link to Ensembl Protein Viewer:ENSP00000478397.1Re-query CCDS DB by Nucleotide ID:ENST00000619548Re-query CCDS DB by Protein ID:ENSP00000478397
Original member Current member NCBI NM_001278279.3 NP_001265208.2 Accepted alive Link to Nucleotide Sequence:NM_001278279.3Link to Protein Sequence:NP_001265208.2Re-query CCDS DB by Nucleotide ID:NM_001278279Re-query CCDS DB by Protein ID:NP_001265208Link to BLAST:NP_001265208.2

Chromosomal Locations for CCDS 74047.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 38297184 38297249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38298449 38298626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38299351 38299468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38306533 38306631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38318687 38318735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38322126 38322299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38322509 38322595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGGCAGCCCCCATACCTCAAGGGTTCTCTTGTTTATCGAGGTTTTTGGGCTGGTGGTCTCGGCAGCCAG
TTCTGGTGACTCAGTCCGCAGCTATAGTTCCAGTAAGAACTAAAAAACGTTTCACACCTCCTATTTATCA
ACCTAAATTTAAAACAGAAAAGGAGTTTATGCAACATGCCCGGAAAGCAGGATTGGTTATTCCTCCAGAA
AAATCGGACCGTTCCATACATCTGGCCTGTACAGCTGGTATATTTGATGCCTATGTTCCTCCTGAGGGTG
ATGCACGCATATCATCTCTTTCAAAGGAGGGACTGATAGAGAGAACTGAACGAATGAAGAAGACTATGGC
ATCACAAGTGTCAATCCGGAGGATAAAAGACTATGATGCCAACTTTAAAATAAAGGACTTCCCTGAAAAA
GCTAAGGATATCTTTATTGAAGCTCACCTTTGTCTAAATAACTCAGACCATGACCGGCTTCATACCTTGG
TAACTGAACACTGTTTTCCAACTCTGGCCATCTATGACCGGTTTGGCCGGTTGATGTATGGACAGGAAGA
TGTACCCAAGGATGTCCTGGAGTATGTTGTATTCGAAAAGCAGTTGACAAACCCCTATGGAAGCTGGAGA
ATGCATACCAAGATCGTTCCCCCATGGGCACCCCCTAAGCAGCCCATCCTTAAGACGGTGATGATCCCTG
GCCCTCAGCTGAAACCAGAAGAAGAATATGAAGAGGCACAAGGAGAGGCCCAGAAGCCTCAGCTAGCCTG
A

Translation (256 aa):
MAAPIPQGFSCLSRFLGWWSRQPVLVTQSAAIVPVRTKKRFTPPIYQPKFKTEKEFMQHARKAGLVIPPE
KSDRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMASQVSIRRIKDYDANFKIKDFPEK
AKDIFIEAHLCLNNSDHDRLHTLVTEHCFPTLAIYDRFGRLMYGQEDVPKDVLEYVVFEKQLTNPYGSWR
MHTKIVPPWAPPKQPILKTVMIPGPQLKPEEEYEEAQGEAQKPQLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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