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Report for CCDS74254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74254.1 Public Homo sapiens 19 ZNF556 24 110 108 CCDS HistoryNCBI Gene:80032Re-query CCDS DB by CCDS ID:74254.1Re-query CCDS DB by GeneID:80032See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000586426.5 ENSP00000467366.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586426.5Link to Ensembl Protein Viewer:ENSP00000467366.1Re-query CCDS DB by Nucleotide ID:ENST00000586426Re-query CCDS DB by Protein ID:ENSP00000467366
Original member Current member NCBI NM_001300843.2 NP_001287772.1 Accepted alive Link to Nucleotide Sequence:NM_001300843.2Link to Protein Sequence:NP_001287772.1Re-query CCDS DB by Nucleotide ID:NM_001300843Re-query CCDS DB by Protein ID:NP_001287772Link to BLAST:NP_001287772.1

Chromosomal Locations for CCDS 74254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2867422 2867424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2873496 2873622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2876093 2876276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2877276 2878329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGACACAGTGGTCTTTGAAGACGTGGTTGTGGATTTCACGCTGGAGGAGTGGGCCTTGCTGAATCCTG
CTCAGAGAAAACTCTACAGAGATGTCATGCTGGAGACCTTCAAGCACCTGGCCTCAGTAGATAATGAGGC
TCAGCTTAAAGCCAGTGGGTCTATTTCTCAGCAGGATACTTCTGGAGAAAAATTATCCCTCAAACAGAAA
ATAGAAAAGTTCACAAGAAAGAATATATGGGCCTCCCTTTTAGGAAAAAATTGGGAAGAACATAGCGTTA
AAGACAAGCACAACACCAAGGAGAGACATTTGAGAAATCCAAGGGTGGAGAGACCATGTAAAAGCAGTAA
AGGTAATAAACGTGGAAGAACCTTCAGAAAGACTCGAAATTGTAATCGTCATCTGCGCAAGAATTGTTGT
ACTAGTGTAAGACGGTACGAATGCAGTCAGTGTGGAAAACTCTTCACCCATTCCTCATCCCTGATAAGGC
ACAAAAGAGCTCACTCTGGACAAAAATTATATAAATGTAAGGAATGTGGGAAAGCCTTCAGTCGCCCTTC
CTACCTACAGACGCATGAGAAAACTCACAGTGGAGAGAAACCCTATGCCTGTCAATCTTGCGGGAAGACA
TTTCTTCGTTCCCACTCTCTCACTGAACATGTAAGGACTCACACTGGAGAGAAACCCTACGAATGTGGGC
AGTGTGGGAAAGGCTTCAGTTGTCCCAAATCCTTTCGCGCACATGTGATGATGCACGCCGGAGGGAGACC
GTATGAGTGCAAGCACTGTGGGAAAGCCTTCAGGTGTCAGAAATCCTTTCGAGTCCATATGATCATGCAC
GCCGGAGGGAGACCGTATGAGTGCAAGCAGTGTGGGAAAGCCTACTGCTGGGCAACATCCTTTCAACGAC
ACGTGAGAATTCACAACGGGGAGAAACCCTATAAGTGTGGAAAATGCGGGAAAGCATTCGGTTGGCCCTC
ATCCTTACACAAACACGCGAGAACGCATGCTAAAAAGAAACCTGTGAGTGGGGGCAGCGTGGGAAAGTCT
TCCGCGAGGCCTCGCCCCTCCACAGATGTCAAATCACAAACTAGAGAGAAAGTCTATAAATGTGAAACGT
GTGGGAAAACGTATGGTTGGTCCTCATCTTTACACAAACATGAGAGAAAGCACACTGGGGAGAAACCTGT
AAATGCAGCCAGTGTGGGAAAACCTTCAGGCGGGCTTTGCTCTTCCAAAAATGTAAGAACGCAGATTGGA
CAGAAGCCCAGTAAATGCGAAAAATGTGGGAAAGCTTTCAGTTGTCCCAAAGCCTTTCAAGGTCATGTGA
GAAGTCACACAGGAAAGAAATCCTGTACATCTAAGTAA

Translation (455 aa):
MDTVVFEDVVVDFTLEEWALLNPAQRKLYRDVMLETFKHLASVDNEAQLKASGSISQQDTSGEKLSLKQK
IEKFTRKNIWASLLGKNWEEHSVKDKHNTKERHLRNPRVERPCKSSKGNKRGRTFRKTRNCNRHLRKNCC
TSVRRYECSQCGKLFTHSSSLIRHKRAHSGQKLYKCKECGKAFSRPSYLQTHEKTHSGEKPYACQSCGKT
FLRSHSLTEHVRTHTGEKPYECGQCGKGFSCPKSFRAHVMMHAGGRPYECKHCGKAFRCQKSFRVHMIMH
AGGRPYECKQCGKAYCWATSFQRHVRIHNGEKPYKCGKCGKAFGWPSSLHKHARTHAKKKPVSGGSVGKS
SARPRPSTDVKSQTREKVYKCETCGKTYGWSSSLHKHERKHTGEKPVNAASVGKPSGGLCSSKNVRTQIG
QKPSKCEKCGKAFSCPKAFQGHVRSHTGKKSCTSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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