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Report for CCDS7450.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7450.1 Public Homo sapiens 10 TM9SF3 24 110 108 CCDS HistoryNCBI Gene:56889Re-query CCDS DB by CCDS ID:7450.1Re-query CCDS DB by GeneID:56889See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7450.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371142.9 ENSP00000360184.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371142.9Link to Ensembl Protein Viewer:ENSP00000360184.4Re-query CCDS DB by Nucleotide ID:ENST00000371142Re-query CCDS DB by Protein ID:ENSP00000360184
Original member Current member NCBI NM_020123.4 NP_064508.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020123.4Link to Protein Sequence:NP_064508.3Re-query CCDS DB by Nucleotide ID:NM_020123Re-query CCDS DB by Protein ID:NP_064508Link to BLAST:NP_064508.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064508.3 589 Q9HD45 589 100% 0 0

Chromosomal Locations for CCDS 7450.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96522263 96522330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96527213 96527289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96527413 96527496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96528031 96528177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96530540 96530608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96533051 96533190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96544076 96544206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96547895 96547989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96551245 96551411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96552928 96553059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96559659 96559736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96561978 96562138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96565304 96565426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96576634 96576829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96586734 96586835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGAGGCCGCTGCCTGGCGCTCTTGGCGTGGCGGCGGCCGCCGCGCTGTGGCTGCTGCTGCTGCTGCTGC
CCCGGACCCGGGCGGACGAGCACGAACACACGTATCAAGATAAAGAGGAAGTTGTCTTATGGATGAATAC
TGTTGGGCCCTACCATAATCGTCAAGAAACATATAAGTACTTTTCACTTCCATTCTGTGTGGGGTCAAAA
AAAAGTATCAGTCATTACCATGAAACTCTGGGAGAAGCACTTCAAGGGGTTGAATTGGAATTTAGTGGTC
TGGATATTAAATTTAAAGATGATGTGATGCCAGCCACTTACTGTGAAATTGATTTAGATAAAGAAAAGAG
AGATGCATTTGTATATGCCATAAAAAATCATTACTGGTACCAGATGTACATAGATGATTTACCAATATGG
GGTATTGTTGGTGAGGCTGATGAAAATGGAGAAGATTACTATCTTTGGACCTATAAAAAACTTGAAATAG
GTTTTAATGGAAATCGAATTGTTGATGTTAATCTAACTAGTGAAGGAAAGGTGAAACTGGTTCCAAATAC
TAAAATCCAGATGTCATATTCAGTAAAATGGAAAAAGTCAGATGTGAAATTTGAAGATCGATTTGACAAA
TATCTTGATCCGTCCTTTTTTCAACATCGGATTCATTGGTTTTCAATTTTCAACTCCTTCATGATGGTGA
TCTTCTTGGTGGGCTTAGTTTCAATGATTTTAATGAGAACATTAAGAAAAGATTATGCTCGGTACAGTAA
AGAGGAAGAAATGGATGATATGGATAGAGACCTAGGAGATGAATATGGATGGAAACAGGTGCATGGAGAT
GTATTTAGACCATCAAGTCACCCACTGATATTTTCCTCTCTGATTGGTTCTGGATGTCAGATATTTGCTG
TGTCTCTCATCGTTATTATTGTTGCAATGATAGAAGATTTATATACTGAGAGGGGATCAATGCTCAGTAC
AGCCATATTTGTCTATGCTGCTACGTCTCCAGTGAATGGTTATTTTGGAGGAAGTCTGTATGCTAGACAA
GGAGGAAGGAGATGGATAAAGCAGATGTTTATTGGGGCATTCCTTATCCCAGCTATGGTGTGTGGCACTG
CCTTCTTCATCAATTTCATAGCCATTTATTACCATGCTTCAAGAGCCATTCCTTTTGGAACAATGGTGGC
CGTTTGTTGCATCTGTTTTTTTGTTATTCTTCCTCTAAATCTTGTTGGTACAATACTTGGCCGAAATCTG
TCAGGTCAGCCCAACTTTCCTTGTCGTGTCAATGCTGTGCCTCGTCCTATACCGGAGAAAAAATGGTTCA
TGGAGCCTGCGGTTATTGTTTGCCTGGGTGGAATTTTACCTTTTGGTTCAATCTTTATTGAAATGTATTT
CATCTTCACGTCTTTCTGGGCATATAAGATCTATTATGTCTATGGCTTCATGATGCTGGTGCTGGTTATC
CTGTGCATTGTGACTGTCTGTGTGACTATTGTGTGCACATATTTTCTACTAAATGCAGAAGATTACCGGT
GGCAATGGACAAGTTTTCTCTCTGCTGCATCAACTGCAATCTATGTTTACATGTATTCCTTTTACTACTA
TTTTTTCAAAACAAAGATGTATGGCTTATTTCAAACATCATTTTACTTTGGATATATGGCGGTATTTAGC
ACAGCCTTGGGGATAATGTGTGGAGCGATTGGTTACATGGGAACAAGTGCCTTTGTCCGAAAAATCTATA
CTAATGTGAAAATTGACTAG

Translation (589 aa):
MRPLPGALGVAAAAALWLLLLLLPRTRADEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSK
KSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIW
GIVGEADENGEDYYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDK
YLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGD
VFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYARQ
GGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNL
SGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVI
LCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFS
TALGIMCGAIGYMGTSAFVRKIYTNVKID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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