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Report for CCDS7478.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7478.2 Public Homo sapiens 10 CNNM1 24 110 108 CCDS HistoryNCBI Gene:26507Re-query CCDS DB by CCDS ID:7478.2Re-query CCDS DB by GeneID:26507See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7478.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356713.5 ENSP00000349147.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356713.5Link to Ensembl Protein Viewer:ENSP00000349147.4Re-query CCDS DB by Nucleotide ID:ENST00000356713Re-query CCDS DB by Protein ID:ENSP00000349147
Original member Current member NCBI NM_020348.3 NP_065081.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020348.3Link to Protein Sequence:NP_065081.2Re-query CCDS DB by Nucleotide ID:NM_020348Re-query CCDS DB by Protein ID:NP_065081Link to BLAST:NP_065081.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065081.2 951 Q9NRU3-1 951 100% 0 0

Chromosomal Locations for CCDS 7478.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 99329388 99330960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99357512 99357655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99360835 99360975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99362227 99362396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99364417 99364516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99364955 99365002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99377055 99377218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99387820 99388003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99388152 99388301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99390306 99390407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 99391437 99391516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2856 nt):
ATGGCGGCGGCCGCGGCGGCGGCAGCAGCGGTGGGTGTCAGGCTCCGGGACTGCTGCAGCCGAGGCGCTG
TGCTCCTGCTCTTCTTTTCCCTGTCTCCTCGGCCCCCGGCCGCCGCCGCCTGGCTGCTGGGCCTGCGGCC
CGAGGACACTGCTGGAGGCCGCGTGTCCCTGGAGGGGGGCACCCTGCGCGCCGCCGAAGGCACCAGCTTC
CTCCTGCGTGTCTATTTCCAGCCAGGACCGCCGGCCACCGCCGCACCGGTGCCCTCACCGACCCTCAACT
CGGGGGAGAATGGCACCGGCGACTGGGCTCCGCGGCTCGTGTTCATCGAGGAGCCCCCGGGCGGTGGCGG
CGTGGCCCCCAGCGCGGTCCCCACTCGCCCCCCGGGACCGCAGCGCTGCAGGGAGCAGAGCGACTGGGCA
TCGGACGTGGAAGTCCTGGGGCCCTTGCGTCCCGGGGGCGTGGCAGGCTCGGCCCTGGTCCAGGTGCGAG
TGCGGGAGCTGCGCAAGGGCGAAGCGGAGCGGGGCGGCGCGGGCGGTGGCGGGAAGCTCTTTTCACTCTG
CGCCTGGGATGGGCGCGCGTGGCACCACCACGGCGCCGCCGGCGGCTTCCTGCTGCGCGTTCGCCCGCGG
TTGTACGGCCCAGGCGGGGACCTGCTGCCCCCTGCGTGGCTGCGGGCGCTCGGGGCGCTCCTGCTGCTAG
CCTTGTCGGCCCTGTTCAGCGGCCTGCGCCTGAGCCTGCTGTCGCTGGACCCGGTGGAGTTACGGGTGCT
GCGGAACAGCGGCTCGGCCGCCGAGCAGGAGCAGGCGCGCCGCGTGCAGGCCGTTCGCGGCAGGGGGACC
CATCTGCTCTGCACCCTACTCCTGGGCCAAGCCGGAGCCAACGCGGCCCTGGCTGGCTGGCTGTACACCT
CGCTGCCGCCGGGCTTCGGGGGCACCGGGGAAGACTACAGCGAAGAGGGGATCCACTTCCCGTGGCTGCC
GGCGCTCGTGTGCACCGGCGCGGTATTCCTGGGCGCCGAAATCTGCCCCTACTCAGTGTGTTCGCGGCAC
GGGCTGGCCATCGCCTCGCACAGCGTGTGCCTGACCCGGCTTCTGATGGCAGCCGCCTTCCCCGTGTGCT
ACCCGCTGGGCCGCCTGCTGGACTGGGCGCTGCGCCAGGAGATAAGCACCTTCTACACGCGGGAGAAGTT
GCTGGAGACGTTGCGGGCCGCAGACCCCTACAGTGACCTGGTGAAGGAGGAGCTCAACATCATACAGGGT
GCCCTGGAGCTGCGCACCAAAGTTGTGGAGGAGGTGCTGACCCCCCTGGGAGACTGCTTCATGCTGCGCT
CAGACGCGGTGCTCGACTTCGCCACTGTCTCCGAGATCCTGCGCAGCGGCTACACTCGCATCCCAGTGTA
CGAGGGTGACCAGCGGCACAACATTGTGGACATTTTATTTGTCAAGGACTTGGCCTTCGTGGACCCCGAC
GACTGCACCCCGCTCCTCACTGTCACCCGCTTCTACAACCGGCCCCTGCATTGTGTTTTCAATGACACCC
GACTGGACACGGTTCTGGAGGAGTTTAAGAAGGGAAAATCTCACCTGGCCATTGTCCAGCGGGTGAATAA
TGAGGGAGAAGGGGACCCTTTCTATGAGGTGATGGGCATTGTCACGCTGGAGGATATCATAGAGGAGATT
ATCAAGTCGGAGATCCTGGATGAAACTGATCTCTACACTGACAATCGGAAAAAGCAGAGGGTCCCGCAAC
GGGAGCGGAAGCGGCATGACTTCTCCTTGTTTAAGCTTTCGGACACGGAGATGCGGGTGAAGATCTCACC
ACAGCTTCTGCTAGCCACACACCGCTTCATGGCCACAGAAGTGGAGCCCTTTAAGTCTCTGTACCTTTCG
GAGAAGATCCTGCTCCGGCTCCTGAAACATCCCAACGTGATCCAGGAGCTGAAGTTTGATGAGAAGAACA
AGAAGGCCCCGGAACACTACCTCTACCAGCGCAACCGCCCTGTGGACTACTTTGTGCTGCTTCTACAGGG
TAAAGTGGAGGTGGAGGTTGGTAAGGAAGGCCTTCGCTTTGAAAATGGAGCCTTTACTTACTATGGCGTC
CCAGCCATCATGACCACTGCTTGCTCAGATAATGACGTGCGGAAGGTTGGAAGTCTGGCTGGATCTTCTG
TCTTTCTAAACCGGTCCCCTTCTCGCTGCAGTGGGTTGAATCGCTCTGAGTCTCCAAACCGAGAGCGCAG
TGACTTTGGGGGCAGCAACACCCAGCTGTACAGCAGCAGCAACAACCTCTACATGCCTGACTACTCAGTC
CACATCCTCAGCGATGTGCAGTTTGTGAAGATCACACGGCAGCAATATCAGAACGCACTCACTGCCTGCC
ACATGGACAGCTCACCTCAGTCCCCTGACATGGAGGCCTTCACAGACGGGGACTCCACTAAGGCCCCCAC
AACCCGGGGCACACCCCAGACCCCTAAGGATGACCCCGCCATCACGCTCCTCAACAACAGGAACAGCCTG
CCGTGCAGCCGCTCAGACGGGCTGAGAAGCCCCAGCGAGGTAGTGTACCTGAGGATGGAGGAGCTGGCCT
TCACCCAGGAAGAAATGACTGACTTCGAGGAGCACAGCACACAGCAGCTCACGCTGTCTCCTGCAGCCGT
TCCCACGAGAGCAGCATCAGATAGTGAATGTTGTAACATCAACCTGGATACAGAGACCAGCCCCTGCAGT
AGCGATTTTGAGGAAAACGTGGGCAAGAAGCTGCTGAGAACCTTGAGTGGCCAAAAAAGGAAGAGGTCAC
CAGAAGGAGAGAGAACCTCTGAGGACAACTCCAATTTAACACCTCTGATCACATGA

Translation (951 aa):
MAAAAAAAAAVGVRLRDCCSRGAVLLLFFSLSPRPPAAAAWLLGLRPEDTAGGRVSLEGGTLRAAEGTSF
LLRVYFQPGPPATAAPVPSPTLNSGENGTGDWAPRLVFIEEPPGGGGVAPSAVPTRPPGPQRCREQSDWA
SDVEVLGPLRPGGVAGSALVQVRVRELRKGEAERGGAGGGGKLFSLCAWDGRAWHHHGAAGGFLLRVRPR
LYGPGGDLLPPAWLRALGALLLLALSALFSGLRLSLLSLDPVELRVLRNSGSAAEQEQARRVQAVRGRGT
HLLCTLLLGQAGANAALAGWLYTSLPPGFGGTGEDYSEEGIHFPWLPALVCTGAVFLGAEICPYSVCSRH
GLAIASHSVCLTRLLMAAAFPVCYPLGRLLDWALRQEISTFYTREKLLETLRAADPYSDLVKEELNIIQG
ALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPD
DCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQRVNNEGEGDPFYEVMGIVTLEDIIEEI
IKSEILDETDLYTDNRKKQRVPQRERKRHDFSLFKLSDTEMRVKISPQLLLATHRFMATEVEPFKSLYLS
EKILLRLLKHPNVIQELKFDEKNKKAPEHYLYQRNRPVDYFVLLLQGKVEVEVGKEGLRFENGAFTYYGV
PAIMTTACSDNDVRKVGSLAGSSVFLNRSPSRCSGLNRSESPNRERSDFGGSNTQLYSSSNNLYMPDYSV
HILSDVQFVKITRQQYQNALTACHMDSSPQSPDMEAFTDGDSTKAPTTRGTPQTPKDDPAITLLNNRNSL
PCSRSDGLRSPSEVVYLRMEELAFTQEEMTDFEEHSTQQLTLSPAAVPTRAASDSECCNINLDTETSPCS
SDFEENVGKKLLRTLSGQKRKRSPEGERTSEDNSNLTPLIT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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