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Report for CCDS74873.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74873.1 Public Homo sapiens 22 POLDIP3 24 110 108 CCDS HistoryNCBI Gene:84271Re-query CCDS DB by CCDS ID:74873.1Re-query CCDS DB by GeneID:84271See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74873.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451060.6 ENSP00000397927.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451060.6Link to Ensembl Protein Viewer:ENSP00000397927.3Re-query CCDS DB by Nucleotide ID:ENST00000451060Re-query CCDS DB by Protein ID:ENSP00000397927
Original member Current member NCBI NM_001278657.2 NP_001265586.1 Accepted alive Link to Nucleotide Sequence:NM_001278657.2Link to Protein Sequence:NP_001265586.1Re-query CCDS DB by Nucleotide ID:NM_001278657Re-query CCDS DB by Protein ID:NP_001265586Link to BLAST:NP_001265586.1

Chromosomal Locations for CCDS 74873.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 42585791 42585968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42587506 42587572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42591955 42592084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42595537 42595614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42596186 42596365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42599698 42599793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42601970 42602107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42602770 42603160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42614799 42614857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGGCGGACATCTCCCTGGACGAACTCATCAGGAAGCGCGGGGCGGCGGCGAAAGGACGGCTTAATGCCA
GACCGGGAGTTGGAGGTGTCCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCAC
AGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGA
GTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGATG
CCAGAGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGC
CCGGGAGAAGATCAGCTTGAAGAGGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTGGGACAGTGACC
CCTGCTCTGAAGCTCACCAAAACCATCCAGAGAATGCATGTGGACCCTGTGGGGTGGATTCTGACCACTG
AGTGTTTCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATGAGAATCAA
TGTTGTCAATAACCACCAGGCCAAACAGAATTTATATGACCTGGATGAAGATGATGATGGTATAGCTTCC
GTTCCTACTAAACAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAGCAGTT
CCAAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGC
TCTCCCTTCCTCTATTCGAACAAAAGCCTTGACCAACATGTCCCGGACACTGGTGAACAAGGAAGAACCC
CCCAAAGAGCTGCCAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATC
TGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCG
ACTGGTCCATCCTGGGGTAGCGGAGGTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAG
TACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAACCTTCACATGAATGGGAATGTTATCACCT
CAGACCAGCCCATCCTGCTGCGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGCGAGCTGCCTCGCAG
GGTGAACTCTGCCTCCTCCTCCAACCCCCCTGCCGAAGTGGACCCTGACACCATCCTGAAGGCACTCTTC
AAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAAAATCAAGCTTTGA

Translation (438 aa):
MADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG
VKDAREKLLQKDARFRIKGKVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVT
PALKLTKTIQRMHVDPVGWILTTECFQVPQQKAMAPLHPHPAGMRINVVNNHQAKQNLYDLDEDDDGIAS
VPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRTKALTNMSRTLVNKEEP
PKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKK
YNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALF
KSSGASVTTQPTEFKIKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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