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Report for CCDS74957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74957.1 Public Homo sapiens 3 THOC7 24 110 108 CCDS HistoryNCBI Gene:80145Re-query CCDS DB by CCDS ID:74957.1Re-query CCDS DB by GeneID:80145See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000469584.5 ENSP00000418518.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469584.5Link to Ensembl Protein Viewer:ENSP00000418518.2Re-query CCDS DB by Nucleotide ID:ENST00000469584Re-query CCDS DB by Protein ID:ENSP00000418518
Original member Current member NCBI NM_001285387.3 NP_001272316.1 Accepted alive Link to Nucleotide Sequence:NM_001285387.3Link to Protein Sequence:NP_001272316.1Re-query CCDS DB by Nucleotide ID:NM_001285387Re-query CCDS DB by Protein ID:NP_001272316Link to BLAST:NP_001272316.1
Original member Current member NCBI NM_001285404.2 NP_001272333.1 Accepted alive Link to Nucleotide Sequence:NM_001285404.2Link to Protein Sequence:NP_001272333.1Re-query CCDS DB by Nucleotide ID:NM_001285404Re-query CCDS DB by Protein ID:NP_001272333Link to BLAST:NP_001272333.1

Chromosomal Locations for CCDS 74957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 63834132 63834199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 63835154 63835223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 63835324 63835390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 63836301 63836358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 63837976 63838062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 63838372 63838480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGCTGAGCACGCTGTCTCAATGTGAATTTTCAATGGGCAAAACTTTACTAGTATATGATATGAATCTCA
GAGAAATGGAAAATTATGAAAAAATTTACAAGGAAATAGAATGTAGCATAGCTGGAGCACATGAAAAAAT
TGCTGAGTGCAAAAAGCAAATTCTTCAAGCAAAACGAATACGAAAAAATCGCCAAGAATATGATGCTTTG
GCAAAAGTGATTCAGCACCATCCAGACAGGCATGAGACATTAAAGGAACTAGAGGCTCTGGGAAAAGAAT
TAGAGCATCTTTCACACATTAAAGAAAGTGTTGAAGATAAGCTGGAATTGAGACGGAAACAGTTTCATGT
TCTTCTTAGTACCATCCATGAACTTCAGCAAACATTGGAAAATGATGAAAAACTCTCAGAGGTAGAAGAA
GCTCAGGAAGCAAGCATGGAAACAGATCCTAAGCCATAG

Translation (152 aa):
MLSTLSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYDAL
AKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQTLENDEKLSEVEE
AQEASMETDPKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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