NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74969.1 Public Homo sapiens 3 FILIP1L 24 110 108 CCDS HistoryNCBI Gene:11259Re-query CCDS DB by CCDS ID:74969.1Re-query CCDS DB by GeneID:11259See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000487087.5 ENSP00000417774.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487087.5Link to Ensembl Protein Viewer:ENSP00000417774.1Re-query CCDS DB by Nucleotide ID:ENST00000487087Re-query CCDS DB by Protein ID:ENSP00000417774
Original member Current member NCBI NM_001282793.2 NP_001269722.1 Accepted alive Link to Nucleotide Sequence:NM_001282793.2Link to Protein Sequence:NP_001269722.1Re-query CCDS DB by Nucleotide ID:NM_001282793Re-query CCDS DB by Protein ID:NP_001269722Link to BLAST:NP_001269722.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269722.1 711 Q4L180-6 711 100% 0 0

Chromosomal Locations for CCDS 74969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 99833235 99833261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99848295 99850403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGGCTCTGGAAAAGTTAGAAGACGCTTTCAACAAAAGCAAACAAGAATGCTACTCTCTGAAATGCAATT
TAGAAAAAGAAAGGATGACCACAAAGCAGTTGTCTCAAGAACTGGAGAGTTTAAAAGTAAGGATCAAAGA
GCTAGAAGCCATTGAAAGTCGGCTAGAAAAGACAGAATTCACTCTAAAAGAGGATTTAACTAAACTGAAA
ACATTAACTGTGATGTTTGTAGATGAACGGAAAACAATGAGTGAAAAATTAAAGAAAACTGAAGATAAAT
TACAAGCTGCTTCTTCTCAGCTTCAAGTGGAGCAAAATAAAGTAACAACAGTTACTGAGAAGTTAATTGA
GGAAACTAAAAGGGCGCTCAAGTCCAAAACCGATGTAGAAGAAAAGATGTACAGCGTAACCAAGGAGAGA
GATGATTTAAAAAACAAATTGAAAGCGGAAGAAGAGAAAGGAAATGATCTCCTGTCAAGAGTTAATATGT
TGAAAAATAGGCTTCAATCATTGGAAGCAATTGAGAAAGATTTCCTAAAAAACAAATTAAATCAAGACTC
TGGGAAATCCACAACAGCATTACACCAAGAAAACAATAAGATTAAGGAGCTCTCTCAAGAAGTGGAAAGA
CTGAAACTGAAGCTAAAGGACATGAAAGCCATTGAGGATGACCTCATGAAAACAGAAGATGAATATGAGA
CTCTAGAACGAAGGTATGCTAATGAACGAGACAAAGCTCAATTTTTATCTAAAGAGCTAGAACATGTTAA
AATGGAACTTGCTAAGTACAAGTTAGCAGAAAAGACAGAGACCAGCCATGAACAATGGCTTTTCAAAAGG
CTTCAAGAAGAAGAAGCTAAGTCAGGGCACCTCTCAAGAGAAGTGGATGCATTAAAAGAGAAAATTCATG
AATACATGGCAACTGAAGACCTAATATGTCACCTCCAGGGAGATCACTCAGTCCTGCAAAAAAAACTAAA
TCAACAAGAAAACAGGAACAGAGATTTAGGAAGAGAGATTGAAAACCTCACTAAGGAGTTAGAGAGGTAC
CGGCATTTCAGTAAGAGCCTCAGGCCTAGTCTCAATGGAAGAAGAATTTCCGATCCTCAAGTATTTTCTA
AAGAAGTTCAGACAGAAGCAGTAGACAATGAACCACCTGATTACAAGAGCCTCATTCCTCTGGAACGTGC
AGTCATCAATGGTCAGTTATATGAGGAGAGTGAGAATCAAGACGAGGACCCTAATGATGAGGGATCTGTG
CTGTCCTTCAAATGCAGCCAGTCTACTCCATGTCCTGTTAACAGAAAGCTATGGATTCCCTGGATGAAAT
CCAAGGAGGGCCATCTTCAGAATGGAAAAATGCAAACTAAACCCAATGCCAACTTTGTGCAACCTGGAGA
TCTAGTCCTAAGCCACACACCTGGGCAGCCACTTCATATAAAGGTTACTCCAGACCATGTACAAAACACA
GCCACTCTTGAAATCACAAGTCCAACCACAGAGAGTCCTCACTCTTACACGAGTACTGCAGTGATACCGA
ACTGTGGCACGCCAAAGCAAAGGATAACCATCCTCCAAAACGCCTCCATAACACCAGTAAAGTCCAAAAC
CTCTACCGAAGACCTCATGAATTTAGAACAAGGCATGTCCCCAATTACCATGGCAACCTTTGCCAGAGCA
CAGACCCCAGAGTCTTGTGGTTCTCTAACTCCAGAAAGGACAATGTCCCCTATTCAGGTTTTGGCTGTGA
CTGGTTCAGCTAGCTCTCCTGAGCAGGGACGCTCCCCAGAACCAACAGAAATCAGTGCCAAGCATGCGAT
ATTCAGAGTCTCCCCAGACCGGCAGTCATCATGGCAGTTTCAGCGTTCAAACAGCAATAGCTCAAGTGTG
ATAACTACTGAGGATAATAAAATCCACATTCACTTAGGAAGTCCTTACATGCAAGCTGTAGCCAGCCCTG
TGAGACCTGCCAGCCCTTCAGCACCACTGCAGGATAACCGAACTCAAGGCTTAATTAACGGGGCACTAAA
CAAAACAACCAATAAAGTCACCAGCAGTATTACTATCACACCAACAGCCACACCTCTTCCTCGACAATCA
CAAATTACAGTGGAACCACTTCTTCTGCCTCATTGA

Translation (711 aa):
MALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELESLKVRIKELEAIESRLEKTEFTLKEDLTKLK
TLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSVTKER
DDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVER
LKLKLKDMKAIEDDLMKTEDEYETLERRYANERDKAQFLSKELEHVKMELAKYKLAEKTETSHEQWLFKR
LQEEEAKSGHLSREVDALKEKIHEYMATEDLICHLQGDHSVLQKKLNQQENRNRDLGREIENLTKELERY
RHFSKSLRPSLNGRRISDPQVFSKEVQTEAVDNEPPDYKSLIPLERAVINGQLYEESENQDEDPNDEGSV
LSFKCSQSTPCPVNRKLWIPWMKSKEGHLQNGKMQTKPNANFVQPGDLVLSHTPGQPLHIKVTPDHVQNT
ATLEITSPTTESPHSYTSTAVIPNCGTPKQRITILQNASITPVKSKTSTEDLMNLEQGMSPITMATFARA
QTPESCGSLTPERTMSPIQVLAVTGSASSPEQGRSPEPTEISAKHAIFRVSPDRQSSWQFQRSNSNSSSV
ITTEDNKIHIHLGSPYMQAVASPVRPASPSAPLQDNRTQGLINGALNKTTNKVTSSITITPTATPLPRQS
QITVEPLLLPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH