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Report for CCDS75013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75013.1 Public Homo sapiens 3 CDV3 24 110 108 CCDS HistoryNCBI Gene:55573Re-query CCDS DB by CCDS ID:75013.1Re-query CCDS DB by GeneID:55573See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000508481.5 ENSP00000422866.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000508481.5Link to Ensembl Protein Viewer:ENSP00000422866.1Re-query CCDS DB by Nucleotide ID:ENST00000508481Re-query CCDS DB by Protein ID:ENSP00000422866
Original member Current member NCBI NM_001282762.2 NP_001269691.1 Accepted alive Link to Nucleotide Sequence:NM_001282762.2Link to Protein Sequence:NP_001269691.1Re-query CCDS DB by Nucleotide ID:NM_001282762Re-query CCDS DB by Protein ID:NP_001269691Link to BLAST:NP_001269691.1
Original member Current member NCBI NM_001282763.1 NP_001269692.1 Accepted alive Link to Nucleotide Sequence:NM_001282763.1Link to Protein Sequence:NP_001269692.1Re-query CCDS DB by Nucleotide ID:NM_001282763Re-query CCDS DB by Protein ID:NP_001269692Link to BLAST:NP_001269692.1

Chromosomal Locations for CCDS 75013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 133575105 133575115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133584002 133584150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133586563 133586722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133587896 133588046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGCAAATAAGCAGTGAAAAGGAAGAAGACGATAATGAAAAGAGACAAGATCCAGGTGATAACTGGGAAG
AAGGTGGAGGTGGTGGTGGAGGTATGGAAAAATCTTCAGGTCCCTGGAATAAAACAGCTCCAGTACAAGC
ACCTCCTGCTCCAGTAATTGTTACAGAAACCCCAGAACCAGCGATGACTAGTGGTGTGTATAGGCCTCCT
GGGGCCAGGTTAACCACAACAAGGAAAACACCACAAGGACCACCAGAAATCTACAGTGATACACAGTTCC
CATCCCTGCAGTCAACTGCCAAGCATGTAGAAAGCCGGAAGGATAAAGAAATGGAGAAGAGCTTTGAAGT
AGTAAGACACAAAAATAGAGGTAGGGATGAGGTTTCAAAAAACCAGGCCCTTAAACTTCAGCTAGACAAC
CAATATGCTGTGCTTGAAAATCAGAAAAGCAGCCACTCACAATACAATTAA

Translation (156 aa):
MQISSEKEEDDNEKRQDPGDNWEEGGGGGGGMEKSSGPWNKTAPVQAPPAPVIVTETPEPAMTSGVYRPP
GARLTTTRKTPQGPPEIYSDTQFPSLQSTAKHVESRKDKEMEKSFEVVRHKNRGRDEVSKNQALKLQLDN
QYAVLENQKSSHSQYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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