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Report for CCDS75104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75104.1 Public Homo sapiens 4 TBC1D14 24 110 108 CCDS HistoryNCBI Gene:57533Re-query CCDS DB by CCDS ID:75104.1Re-query CCDS DB by GeneID:57533See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446947.6 ENSP00000405875.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446947.6Link to Ensembl Protein Viewer:ENSP00000405875.3Re-query CCDS DB by Nucleotide ID:ENST00000446947Re-query CCDS DB by Protein ID:ENSP00000405875
Original member Current member NCBI NM_001286805.2 NP_001273734.1 Accepted alive Link to Nucleotide Sequence:NM_001286805.2Link to Protein Sequence:NP_001273734.1Re-query CCDS DB by Nucleotide ID:NM_001286805Re-query CCDS DB by Protein ID:NP_001273734Link to BLAST:NP_001273734.1

Chromosomal Locations for CCDS 75104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 6996383 6996407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 6999085 6999202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7001145 7001251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7004844 7004924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7006632 7006726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7009877 7009948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7010653 7010781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7014448 7014557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7025004 7025262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7030327 7030392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGTGGTTCAGGCCAAAAAGCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGAT
GCAGAGTCGAGGAAAGCATTGGAAACGCTGTGCTCACCTGGAATAATGAGATCTTACCTAACTGGGAAAC
AATGTGGTGCTCTAGAAAAGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAAGTC
TGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGAGCTCTTTGACATCTGTCTTGCCCGAGCCA
AGGAGAGGTGGCGGTCCCTTAGCACAGGAGGCTCTGAAGTGGAGAACGAAGATGCTGGTTTTTCAGCAGC
AGACAGAGAAGCCAGTCTGGAGCTTATTAAACTGGACATTTCTAGAACATTTCCTAATCTCTGCATTTTC
CAGCAAGGTGGTCCATATCATGACATGTTGCACAGTATTTTGGGCGCTTATACTTGTTACCGGCCAGATG
TGGGTTATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAACTTAGATACTGCAGATGCCTT
TATTGCCTTTTCTAACCTTCTGAATAAACCCTGTCAAATGGCGTTTTTTAGAGTGGACCATGGCCTTATG
TTGACTTATTTTGCTGCATTTGAAGTATTCTTTGAAGAAAATTTGCCGAAATTATTTGCGCATTTCAAGA
AGAACAACCTAACTCCAGATATCTACCTAATTGATTGGATCTTTACCTTATATAGTAAATCTCTGCCCCT
CGACCTGGCCTGTCGTATCTGGGACGTGTTCTGTCGCGATGGGGAAGAGTTCCTGTTCCGCACGGCCCTG
GGCATCCTGAAGCTGTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCC
GGCTGCCCGAGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA
CAAGAAGTGGGCTCAGGTACTGACTGCATTGCAGAAAGACAGCCGGGAAATGGAGAAGGGAAGTCCGTCC
CTCCGACACTGA

Translation (353 aa):
MVVQAKKRELKEAQRRKKQLEERCRVEESIGNAVLTWNNEILPNWETMWCSRKVRDLWWQGIPPSVRGKV
WSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIF
QQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLM
LTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTAL
GILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQSRNKKWAQVLTALQKDSREMEKGSPS
LRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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