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Report for CCDS75296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75296.1 Public Homo sapiens 5 KIF3A 24 110 108 CCDS HistoryNCBI Gene:11127Re-query CCDS DB by CCDS ID:75296.1Re-query CCDS DB by GeneID:11127See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75296.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403231.6 ENSP00000385808.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403231.6Link to Ensembl Protein Viewer:ENSP00000385808.1Re-query CCDS DB by Nucleotide ID:ENST00000403231Re-query CCDS DB by Protein ID:ENSP00000385808
Original member Current member NCBI NM_001300791.2 NP_001287720.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001300791.2Link to Protein Sequence:NP_001287720.1Re-query CCDS DB by Nucleotide ID:NM_001300791Re-query CCDS DB by Protein ID:NP_001287720Link to BLAST:NP_001287720.1

Chromosomal Locations for CCDS 75296.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132696634 132696682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132699171 132699295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132700216 132700284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132700647 132700700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702087 132702212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702558 132702668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132702885 132703065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132703463 132703619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132706451 132706459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132708907 132708978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132710959 132711057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132715757 132715931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132716245 132716442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132716845 132716984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132720609 132720714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132726128 132726212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132726354 132726498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132734205 132734478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132737414 132737419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2181 nt):
ATGCCGATCAATAAATCAGAGAAGCCAGAAAGCTGCGATAATGTGAAGGTTGTTGTTAGGTGCCGGCCCC
TCAATGAGAGAGAGAAATCAATGTGCTACAAACAGGCTGTCAGTGTGGATGAGATGAGGGGAACTATCAC
TGTACATAAGACTGATTCTTCCAATGAACCTCCAAAGACATTTACTTTTGATACTGTTTTTGGACCAGAG
AGTAAACAACTTGATGTTTATAACTTAACTGCAAGACCTATTATTGATTCTGTACTTGAAGGCTACAATG
GGACTATTTTTGCATATGGACAAACCGGAACAGGCAAAACTTTTACCATGGAAGGTGTTCGAGCTATTCC
TGAACTTAGAGGAATAATTCCCAATTCATTTGCTCACATATTTGGTCATATTGCAAAAGCGGAGGGTGAT
ACAAGATTTTTGGTTCGAGTGTCTTATTTGGAAATATATAATGAAGAAGTTCGTGACCTTTTGGGCAAGG
ATCAGACACAAAGGTTAGAGGTTAAAGAAAGACCTGATGTGGGAGTTTATATCAAAGATTTATCAGCTTA
TGTGGTAAATAATGCTGATGATATGGATAGAATTATGACGCTAGGCCACAAAAATCGTTCTGTTGGTGCA
ACTAATATGAACGAACATAGTTCCCGTTCCCATGCCATCTTTACAATTACTATAGAATGCAGTGAAAAAG
GCATTGATGGTAACATGCATGTCAGGATGGGGAAGCTCCATCTTGTAGATCTTGCTGGTTCAGAAAGACA
GGCAAAAACTGGAGCTACTGGACAGCGCCTAAAGGAAGCTACAAAAATCAATCTTTCACTTTCCACCCTT
GGTAATGTAATTTCTGCCTTGGTTGATGGAAAAAGCACTCATGTGCCTTATCGTAACTCTAAACTGACTC
GTCTTCTTCAGGATTCCTTAGGAGGAAATTCAAAAACCATGATGTGTGCAAATATTGGGCCAGCAGATTA
CAATTATGATGAAACTATCAGTACATTACGGTATGCCAATCGTGCTAAGAATATTAAAAATAAAGCTAGA
ATTAATGAAGATCCAAAGGATGCTTTGCTGCGTCAGTTCCAGAAAGAAATAGAAGAACTGAAAAAGAAGC
TTGAAGAAGGAGAAGAAATATCAGGCTCTGATATCAGTGGGTCAGAGGAAGATGATGATGAAGAGGGTGA
GGTTGGAGAAGATGGAGAGAAAAGGAAAAAAAGAAGGGGCAGTAGCAGCAGCAGTAGTTCAGACTCCACA
TGTTCTGTCATAGAGAAACCTCTGGATAAGTTCTTGCCTAATCAAGCAGGAAAAAAGAAAGTCTCCCCAG
ACAAGATGATTGAAATGCAAGCAAAAATTGATGAGGAGAGAAAAGCACTTGAAACAAAGCTCGACATGGA
AGAAGAAGAAAGAAACAAGGCTAGAGCTGAATTAGAGAAACGGGAAAAAGATCTTCTTAAAGCCCAACAA
GAGCATCAGTCTTTGCTGGAAAAATTATCTGCCCTGGAAAAGAAGGTAATTGTTGGTGGGGTTGACTTGT
TGGCCAAAGCTGAGGAACAAGAGAAACTTCTTGAAGAATCTAACATGGAACTGGAAGAAAGGAGGAAAAG
AGCAGAGCAACTTCGCAGAGAACTTGAGGAAAAAGAGCAAGAACGCTTGGATATTGAAGAAAAATATACC
AGTTTGCAAGAGGAAGCACAGGGAAAGACCAAGAAGTTAAAGAAAGTTTGGACTATGCTGATGGCTGCAA
AGTCAGAGATGGCTGATCTCCAACAAGAACATCAGAGGGAAATTGAAGGCCTACTGGAGAACATTCGGCA
ACTTAGCCGGGAGCTTCGACTTCAGATGCTTATTATTGATAACTTTATACCTCGGGATTATCAGGAAATG
ATTGAAAACTATGTCCATTGGAATGAAGACATAGGAGAATGGCAGCTAAAATGTGTTGCTTATACAGGAA
ATAACATGAGGAAGCAAACCCCAGTACCTGATAAAAAGGAGAAAGATCCCTTTGAGGTGGACCTTTCTCA
CGTGTATCTTGCCTATACTGAGGAGAGTCTGCGTCAGTCTTTGATGAAACTAGAAAGACCACGAACTTCA
AAGGGGAAAGCAAGGCCAAAGACAGGGAGAAGAAAGCGTTCTGCAAAGCCTGAAACTGTAATTGACTCTT
TACTGCAGTAA

Translation (726 aa):
MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYKQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPE
SKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAIPELRGIIPNSFAHIFGHIAKAEGD
TRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGA
TNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTL
GNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKAR
INEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEVGEDGEKRKKRRGSSSSSSSDST
CSVIEKPLDKFLPNQAGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQQ
EHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRRELEEKEQERLDIEEKYT
SLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEM
IENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKEKDPFEVDLSHVYLAYTEESLRQSLMKLERPRTS
KGKARPKTGRRKRSAKPETVIDSLLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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