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Report for CCDS75382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75382.1 Public Homo sapiens 5 RMND5B 24 110 108 CCDS HistoryNCBI Gene:64777Re-query CCDS DB by CCDS ID:75382.1Re-query CCDS DB by GeneID:64777See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75382.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542098.2 ENSP00000437630.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542098.2Link to Ensembl Protein Viewer:ENSP00000437630.1Re-query CCDS DB by Nucleotide ID:ENST00000542098Re-query CCDS DB by Protein ID:ENSP00000437630
Original member Current member NCBI NM_001288795.2 NP_001275724.1 Accepted alive Link to Nucleotide Sequence:NM_001288795.2Link to Protein Sequence:NP_001275724.1Re-query CCDS DB by Nucleotide ID:NM_001288795Re-query CCDS DB by Protein ID:NP_001275724Link to BLAST:NP_001275724.1

Chromosomal Locations for CCDS 75382.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 178135213 178135312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178142583 178142728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178142852 178142992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178143627 178143727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178143942 178144108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178146114 178146279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178147533 178147635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178147729 178147883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178147969 178148032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGGCTGACTGCAGCCTTGACCTCCCGGGCTCAAGCAGTCCTCCGTCCCACCTCAGCCTTCTGAGGAGCT
GGGACCACAGGCGTGTGCCACCATGCCCAGCCCTCCAGGGGACCCCTCTCTCAGCCACCCTCTCTCTGGT
GATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCAC
AGCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAG
ATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCTGTATCA
GCAGGGCATGCTCAGCGTGGCCGAGGAGCTGTGCCAGGAATCAACGCTGAATGTGGACTTGGATTTCAAG
CAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAAT
GGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCA
CTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACTTCCAG
CCCTTTGCTCGGCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGCGGCTGGGCT
TGGAGAAGTCACCCTACTGCCACCTGCTGGACAGCAGCCACTGGGCAGAGATCTGTGAGACCTTTACCCG
GGACGCCTGTTCCCTGCTGGGGCTTTCTGTGGAGTCCCCCCTTAGCGTCAGCTTTGCCTCTGGCTGTGTG
GCGCTGCCTGTGTTGATGAACATCAAGGCTGTGATTGAGCAGCGGCAGTGCACTGGGGTCTGGAATCACA
AGGACGAGTTACCGATTGAGATTGAACTAGGCATGAAGTGCTGGTACCACTCCGTGTTCGCTTGCCCCAT
CCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGAT
GCACTCAATAAGCTCATTAATGGAGGAAAGCTGAAGTGTCCCTACTGTCCCATGGAGCAGAACCCGGCAG
ATGGGAAACGCATCATATTCTGA

Translation (380 aa):
MADCSLDLPGSSSPPSHLSLLRSWDHRRVPPCPALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIH
SSVSRVGKAIDRNFDSEICGVVSDAVWDAREQQQQILQMAIVEHLYQQGMLSVAEELCQESTLNVDLDFK
QPFLELNRILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLLAGGPAKQLEALSYARHFQ
PFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDSSHWAEICETFTRDACSLLGLSVESPLSVSFASGCV
ALPVLMNIKAVIEQRQCTGVWNHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRD
ALNKLINGGKLKCPYCPMEQNPADGKRIIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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