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Report for CCDS7540.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7540.1 Public Homo sapiens 10 WBP1L 24 110 108 CCDS HistoryNCBI Gene:54838Re-query CCDS DB by CCDS ID:7540.1Re-query CCDS DB by GeneID:54838See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7540.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369889.5 ENSP00000358905.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369889.5Link to Ensembl Protein Viewer:ENSP00000358905.4Re-query CCDS DB by Nucleotide ID:ENST00000369889Re-query CCDS DB by Protein ID:ENSP00000358905
Original member Current member NCBI NM_017787.5 NP_060257.4 Accepted alive Link to Nucleotide Sequence:NM_017787.5Link to Protein Sequence:NP_060257.4Re-query CCDS DB by Nucleotide ID:NM_017787Re-query CCDS DB by Protein ID:NP_060257Link to BLAST:NP_060257.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060257.4 342 Q9NX94-1 342 100% 0 0

Chromosomal Locations for CCDS 7540.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102776391 102776417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102797993 102798095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102809893 102810054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102812595 102813331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGCCTTTCCTTTTGGGTCTTAGACAGGATAAGGAAGCCTGTGTGGGTACCAACAATCAAAGCTACATCT
GTGACACAGGACACTGCTGTGGACAGTCTCAGTGCTGCAACTACTACTATGAACTCTGGTGGTTCTGGCT
GGTGTGGACCATCATCATCATCCTGAGCTGCTGCTGTGTTTGCCACCACCGCCGAGCCAAGCACCGCCTT
CAGGCCCAGCAGCGGCAACATGAAATCAACCTGATCGCTTACCGAGAAGCCCACAATTACTCAGCGCTGC
CATTTTATTTCAGGTTTTTGCCAAACTATTTACTACCTCCTTATGAGGAAGTGGTGAACCGACCTCCAAC
TCCTCCCCCACCATACAGTGCCTTCCAGCTACAGCAGCAGCAGCTGCTGCCTCCACAGTGTGGCCCTGCA
GGTGGCAGTCCCCCGGGCATCGATCCCACCAGGGGATCCCAGGGGGCACAGAGCAGCCCCTTGTCTGAGC
CCAGCAGAAGCAGCACAAGACCCCCAAGCATCGCTGACCCTGATCCCTCTGACCTACCAGTTGACCGAGC
AGCCACCAAAGCCCCAGGGATGGAGCCCAGTGGCTCTGTGGCTGGCCTGGGGGAGCTGGACCCGGGGGCC
TTCCTGGACAAAGATGCAGAATGTAGGGAGGAGCTGCTGAAAGATGACAGCTCTGAACACGGCGCACCCG
ACAGCAAAGAGAAGACGCCTGGGAGACATCGCCGCTTCACAGGTGACTCGGGCATTGAAGTGTGTGTGTG
CAACCGGGGCCACCATGACGATGACCTCAAAGAGTTCAACACACTCATCGATGATGCTCTGGATGGGCCC
CTGGACTTCTGCGACAGCTGCCATGTGCGGCCCCCTGGTGATGAGGAGGAAGGCCTCTGTCAGTCCTCTG
AGGAGCAGGCTCGAGAGCCTGGGCACCCGCACCTGCCACGGCCGCCCGCATGCCTGCTGCTGAACACCAT
CAACGAGCAGGACTCTCCCAACTCCCAGAGCAGCAGCTCCCCCAGCTAG

Translation (342 aa):
MPFLLGLRQDKEACVGTNNQSYICDTGHCCGQSQCCNYYYELWWFWLVWTIIIILSCCCVCHHRRAKHRL
QAQQRQHEINLIAYREAHNYSALPFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPA
GGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGA
FLDKDAECREELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDGP
LDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQDSPNSQSSSSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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