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Report for CCDS75854.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75854.1 Public Homo sapiens 9 AGTPBP1 24 110 108 CCDS HistoryNCBI Gene:23287Re-query CCDS DB by CCDS ID:75854.1Re-query CCDS DB by GeneID:23287See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75854.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337006.8 ENSP00000338512.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337006.8Link to Ensembl Protein Viewer:ENSP00000338512.5Re-query CCDS DB by Nucleotide ID:ENST00000337006Re-query CCDS DB by Protein ID:ENSP00000338512
Original member Current member NCBI NM_001286715.1 NP_001273644.1 Accepted alive Link to Nucleotide Sequence:NM_001286715.1Link to Protein Sequence:NP_001273644.1Re-query CCDS DB by Nucleotide ID:NM_001286715Re-query CCDS DB by Protein ID:NP_001273644Link to BLAST:NP_001273644.1

Chromosomal Locations for CCDS 75854.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 85547109 85547286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85575315 85575475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85578920 85579096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85585463 85585594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85586831 85586960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85588298 85588478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85589528 85589681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85592560 85592704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85596362 85596449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85618983 85619131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85619215 85619301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85621202 85621285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85632662 85633374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85642827 85642943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85646321 85646418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85655143 85655320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85657435 85657643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85660936 85660973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85669485 85669578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85672550 85672681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85677436 85677582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85678335 85678398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85681268 85681335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85692689 85692813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 85741775 85741962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3837 nt):
ATGCGGACAGGTTCCGCCGCCTCCAGCGCCGCCGCCGCAGCTGCCGCCGCCGCCGCCTCCGCCTCGCCTG
CCACCGGGGTTTGTATGAAAACACCGGGCGGCGGGCGGCGAGGGATCCGCCGTGATCCAGGTGCTGAGCC
GGGTGCTGCGGCTCTGCGCGGTCCCCGCCAGCGCCCCATCCTGAGCCGCCTTACCAATAATTCTAGGATC
GTAGGACTCCTGGCTCAACTGGAGAAGATCAATGCTGAGCCTTCAGAATCAGACACTGCCCGATATGTTA
CATCAAAAATTCTTCATCTGGCTCAGAGTCAAGAAAAAACAAGGAGAGAAATGACAGCCAAAGGTTCTAC
AGGAATGGAAATTCTGCTGTCAACATTAGAGAACACAAAAGATCTTCAAACTACACTTAATATCTTAAGC
ATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGGTCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCAC
AAATATTGTTGCAGTTACTTATGAATGCCAGCAAAGAATCTCCCCCACATGAGGACTTAATGGTACAGAT
TCATTCTATTCTTGCAAAGATTGGACCAAAAGATAAAAAATTTGGAGTAAAGGCTAGAATTAATGGGGCT
CTGAATATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAATCATCGCTTGGTTCTACCTTGCCTTCAGC
TTTTACGAGTATATTCTGCCAACTCTGTGAATTCAGTATCCTTAGGGAAAAATGGAGTTGTGGAACTGAT
GTTTAAAATCATTGGACCATTTAGTAAGAAGAATTCCAGTCTTATAAAGGTTGCTTTAGACACTCTTGCT
GCATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTGTAGACAGAGGATATGTCCAAGTGCTTTTAACAA
TTTATGTAGATTGGCACCGCCATGATAACCGGCATAGAAACATGCTCATTCGGAAAGGAATTTTACAGAG
TTTAAAAAGTGTTACAAACATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAAATTCTG
TATAATACTTCGCAAGAATGTCTGGCAGTCAGGACTCTGGATCCTCTTGTCAATACCTCCAGTCTGATAA
TGAGGAAGTGTTTCCCAAAAAATCGACTGCCACTCCCAACAATTAAAAGTTCTTTTCATTTCCAGTTGCC
TGTTATTCCTGTGACTGGTCCTGTGGCTCAGCTCTACAGCTTACCTCCTGAAGTGGATGACGTAGTAGAT
GAAAGTGATGACAACGATGATATTGATGTAGAAGCTGAAAACGAAACTGAGAATGAAGATGACCTAGATC
AAAATTTTAAGAATGATGATATTGAAACAGATATTAACAAACTAAAACCCCAGCAAGAACCGGGACGAAC
AATAGAAGATCTAAAAATGTATGAACACCTTTTCCCTGAGCTTGTTGATGATTTTCAGGACTATGATTTA
ATCTCCAAAGAACCAAAGCCTTTTGTATTTGAGGGAAAAGTACGTGGTCCTATTGTTGTTCCTACGGCAG
GCGAGGAAACATCTGGGAATTCTGGCAATTTAAGAAAAGTTGTAATGAAGGAGAACATATCTTCTAAAGG
AGATGAAGGTGAAAAGAAGTCTACCTTTATGGATCTAGCAAAAGAAGATATTAAAGATAATGATAGAACA
TTACAACAGCAGCCAGGTGATCAAAATAGAACTATTTCATCAGTCCATGGTTTAAACAATGATATTGTAA
AGGCCTTGGACCGAATTACATTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAA
GAAGGACTGCAGTCTTCCTCTTACTGTCCTTACCTGTGCTAAAGCATGTCCACACATGGCTACTTGTGGA
AATGTTCTGTTTGAGGGAAGAACAGTTCAGCTAGGGAAGCTTTGCTGCACTGGAGTTGAAACTGAAGATG
ATGAAGATACTGAGTCAAATTCATCGGTAGAACAAGCATCGGTTGAAGTACCTGATGGACCAACACTCCA
TGACCCAGACCTCTATATTGAGATTGTGAAAAATACGAAGTCTGTCCCAGAATATTCAGAGGTGGCTTAT
CCCGATTATTTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATTTTAGAAAGGCCTTATGGTGTACAAA
GGACAAAAATTGCTCAAGATATTGAAAGGCTAATACATCAGAGTGATATCATAGATCGTGTGGTATATGA
CTTGGATAACCCAAATTACACCATTCCAGAAGAGGGAGATATTTTGAAATTTAACTCCAAATTTGAGTCT
GGGAATCTGCGCAAAGTAATTCAAATTAGAAAAAATGAATATGATCTTATTCTGAACTCAGACATAAACA
GCAATCATTATCATCAGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAGGTGTTGCTTACAGGTTTAA
CATCATTAACTGTGAAAAGTCCAACAGTCAGTTTAATTATGGTATGCAACCACTCATGTATTCGGTTCAG
GAAGCATTAAATGCCAGACCATGGTGGATTCGTATGGGGACTGACATTTGTTACTATAAAAATCATTTCT
CAAGAAGTTCAGTTGCTGCAGGTGGGCAAAAGGGAAAATCCTACTATACAATTACATTTACTGTCAATTT
TCCACATAAAGATGATGTTTGCTACTTTGCTTATCACTATCCATATACGTATTCAACTTTACAGATGCAT
CTTCAAAAATTGGAATCAGCACACAATCCTCAGCAAATCTATTTTCGGAAAGATGTGTTATGTGAAACCC
TGTCTGGAAACAGCTGCCCCTTGGTGACTATAACAGCAATGCCAGAGTCTAATTATTATGAACATATCTG
CCATTTCAGAAATCGCCCTTACGTTTTCTTGTCTGCTCGGGTACATCCTGGAGAAACTAATGCAAGTTGG
GTTATGAAAGGAACGTTGGAATATCTCATGAGCAATAACCCCACTGCTCAGAGCTTACGAGAATCTTATA
TTTTTAAAATTGTCCCTATGTTAAATCCAGATGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAGTGG
AGAGGATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGATTTACATCCTACAATTTACCATGCTAAGGGG
CTGTTGCAATACTTGGCTGCAGTGAAGCGTTTACCCTTGGTTTATTGTGATTATCATGGCCATTCCCGAA
AGAAGAATGTATTTATGTATGGTTGCAGCATCAAAGAGACAGTGTGGCATACCAATGATAATGCAACTTC
ATGTGATGTTGTGGAGGATACGGGATACAGGACATTGCCTAAGATACTGAGCCATATCGCCCCAGCATTT
TGCATGAGCAGCTGTAGCTTCGTAGTGGAAAAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGGAGGG
AAATAGGAGTACAAAGAAGTTATACCATGGAGAGTACTTTATGTGGCTGTGATCAGGGAAAATACAAGGG
TTTACAGATTGGTACCCGAGAACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGTCTTTTACGTTTGAAA
AGACTGACCTCTCCATTGGAGTATAATCTGCCTTCCAGCCTGCTTGACTTTGAAAATGATTTAATTGAAT
CAAGCTGCAAAGTAACTAGCCCTACCACTTATGTCTTGGATGAAGATGAACCTCGATTCCTTGAAGAAGT
TGATTACAGTGCAGAAAGTAATGATGAGTTAGATATTGAGTTGGCTGAAAATGTAGGAGATTATGAACCT
TCTGCTCAAGAAGAAGTACTTTCTGACTCTGAATTATCAAGAACATACCTACCTTGA

Translation (1278 aa):
MRTGSAASSAAAAAAAAAASASPATGVCMKTPGGGRRGIRRDPGAEPGAAALRGPRQRPILSRLTNNSRI
VGLLAQLEKINAEPSESDTARYVTSKILHLAQSQEKTRREMTAKGSTGMEILLSTLENTKDLQTTLNILS
ILVELVSAGGGRRVSFLVTKGGSQILLQLLMNASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGA
LNITLNLVKQNLQNHRLVLPCLQLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVALDTLA
ALLKSKTNARRAVDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKLGRKAFIDANGMKIL
YNTSQECLAVRTLDPLVNTSSLIMRKCFPKNRLPLPTIKSSFHFQLPVIPVTGPVAQLYSLPPEVDDVVD
ESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKMYEHLFPELVDDFQDYDL
ISKEPKPFVFEGKVRGPIVVPTAGEETSGNSGNLRKVVMKENISSKGDEGEKKSTFMDLAKEDIKDNDRT
LQQQPGDQNRTISSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPLTVLTCAKACPHMATCG
NVLFEGRTVQLGKLCCTGVETEDDEDTESNSSVEQASVEVPDGPTLHDPDLYIEIVKNTKSVPEYSEVAY
PDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIHQSDIIDRVVYDLDNPNYTIPEEGDILKFNSKFES
GNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQ
EALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMH
LQKLESAHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASW
VMKGTLEYLMSNNPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKG
LLQYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILSHIAPAF
CMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGTRELEEMGAKFCVGLLRLK
RLTSPLEYNLPSSLLDFENDLIESSCKVTSPTTYVLDEDEPRFLEEVDYSAESNDELDIELAENVGDYEP
SAQEEVLSDSELSRTYLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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