NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7662.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7662.2 Public Homo sapiens 10 TCERG1L 24 110 108 CCDS HistoryNCBI Gene:256536Re-query CCDS DB by CCDS ID:7662.2Re-query CCDS DB by GeneID:256536See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7662.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368642.4 ENSP00000357631.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368642.4Link to Ensembl Protein Viewer:ENSP00000357631.4Re-query CCDS DB by Nucleotide ID:ENST00000368642Re-query CCDS DB by Protein ID:ENSP00000357631
Original member Current member NCBI NM_174937.4 NP_777597.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_174937.4Link to Protein Sequence:NP_777597.2Re-query CCDS DB by Nucleotide ID:NM_174937Re-query CCDS DB by Protein ID:NP_777597Link to BLAST:NP_777597.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_777597.2 586 Q5VWI1 586 100% 0 0

Chromosomal Locations for CCDS 7662.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 131093162 131093318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131098306 131098424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131104265 131104354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131116799 131116934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131134379 131134448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131146506 131146660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131163122 131163210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131166797 131166885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131260259 131260444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131308211 131308391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131309153 131309299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 131311294 131311635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGCAGGCGGGCGCCAGGTTCCAGCGGCGGCGGCGGCAGCTGCAGCAGCAGCAGCCCCGGCGGCGGCAGC
CTCTCCTCTGGCCGATGGACGCAGAGCCGCCGCCGCCGCCGCCCTGGGTCTGGATGGTGCCGGGCTCGGC
CGGGCTGCTCCGGCTCAGCGCGGGGGTCGTGGTTCCCCCGGTGCTGCTCGCCTCGGCCCCGCCGCCCGCG
GCCCCGCTGCTCCCCGGTCTCCCCGGCTGGCCGGCCCCGAGCGAGCCGGTGCTCCCGCTGCTGCCGCTGC
CCTCTGCGCCAGACTCCGCCGCCGCCGCCGCCGCGCACCCCTTCCCCGCGCTCCACGGGCAGTGGCTGTT
TGGTGGCCATTCTCCGTCCCTAGGACTGCCCCCCTCTTCCACAGTGGAGCTGGTGCCCGTCTTCCCACAT
CTCTGCCCTTCTGCTCTTGCAACCCCTATTGGGAAAAGTTGGATAGACAAAAGGATTCCTAACTGTAAGA
TCTTTTTTAATAATTCCTTTGCTCTGGACTCAACGTGGATACATCCTGAGGAGTCAAGGTTTTTCCATGG
GCATGAAAAGCCTCGTTTGCTGGCAAATCAAGTAGCTGTGTCTCTGTCCAGGCCGGCTCCTGCCTCCAGG
CCGCTCCCCACGGTGGTGTTAGCACCTCAGCCCATCCCAGGTGGCTGCCATAACAGCCTTAAGGTGACCA
GCAGCCCCGCCATTGCCATCGCCACCGCCGCCGCCGCTGCCATGGTCTCCGTGGACCCTGAGAACCTCCG
GGGCCCGTCCCCCTCCAGCGTGCAGCCGCGCCACTTCCTGACCTTGGCACCCATCAAAATACCCCTCCGG
ACGTCCCCCGTCTCAGATACAAGGACAGAGCGGGGCCGAGTGGCCCGCCCTCCTGCCCTGATGCTGCGGG
CCCAGAAGAGCCGGGATGGAGACAAAGAAGACAAGGAGCCTCCACCGATGCTGGGGGGAGGAGAGGACAG
CACAGCCAGAGGCAACAGGCCAGTGGCCTCCACCCCGGTGCCCGGATCCCCCTGGTGTGTGGTCTGGACG
GGCGATGACCGAGTTTTCTTCTTCAACCCAACGATGCACCTGTCTGTCTGGGAGAAGCCCATGGACCTGA
AGGACCGCGGAGACCTCAACAGGATCATTGAGGACCCGCCCCACAAACGCAAGCTGGAGGCACCAGCAAC
TGACAACAGCGATGGGTCCAGTTCTGAAGACAACAGGGAAGACCAAGATGTGAAAACCAAGAGGAACCGG
ACCGAAGGCTGCGGGAGTCCCAAGCCAGAGGAGGCAAAGAGAGAGGACAAAGGCACAAGGACGCCGCCCC
CGCAGATCCTCCTGCCTCTGGAGGAGCGTGTGACCCACTTCCGAGACATGCTGCTGGAGAGAGGGGTATC
AGCATTTTCTACCTGGGAGAAAGAATTACACAAAATCGTGTTTGACCCACGCTATCTCCTGCTCAACTCT
GAGGAACGAAAGCAGATATTTGAACAGTTTGTCAAGACAAGAATAAAAGAAGAATACAAGGAAAAGAAAA
GTAAATTGCTGCTAGCCAAAGAAGAATTCAAGAAACTTCTAGAGGAATCTAAAGTGTCTCCCAGGACCAC
GTTTAAGGAGTTTGCAGAGAAATACGGCCGGGATCAGAGGTTCCGACTTGTTCAAAAAAGAAAGGACCAG
GAGCATTTTTTCAACCAATTCATACTTATTCTTAAGAAACGGGACAAGGAAAACAGACTAAGGCTGCGGA
AAATGAGATGA

Translation (586 aa):
MQAGARFQRRRRQLQQQQPRRRQPLLWPMDAEPPPPPPWVWMVPGSAGLLRLSAGVVVPPVLLASAPPPA
APLLPGLPGWPAPSEPVLPLLPLPSAPDSAAAAAAHPFPALHGQWLFGGHSPSLGLPPSSTVELVPVFPH
LCPSALATPIGKSWIDKRIPNCKIFFNNSFALDSTWIHPEESRFFHGHEKPRLLANQVAVSLSRPAPASR
PLPTVVLAPQPIPGGCHNSLKVTSSPAIAIATAAAAAMVSVDPENLRGPSPSSVQPRHFLTLAPIKIPLR
TSPVSDTRTERGRVARPPALMLRAQKSRDGDKEDKEPPPMLGGGEDSTARGNRPVASTPVPGSPWCVVWT
GDDRVFFFNPTMHLSVWEKPMDLKDRGDLNRIIEDPPHKRKLEAPATDNSDGSSSEDNREDQDVKTKRNR
TEGCGSPKPEEAKREDKGTRTPPPQILLPLEERVTHFRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNS
EERKQIFEQFVKTRIKEEYKEKKSKLLLAKEEFKKLLEESKVSPRTTFKEFAEKYGRDQRFRLVQKRKDQ
EHFFNQFILILKKRDKENRLRLRKMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH