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Report for CCDS76658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76658.1 Public Homo sapiens 14 RBM23 24 110 108 CCDS HistoryNCBI Gene:55147Re-query CCDS DB by CCDS ID:76658.1Re-query CCDS DB by GeneID:55147See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542016.6 ENSP00000438504.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542016.6Link to Ensembl Protein Viewer:ENSP00000438504.2Re-query CCDS DB by Nucleotide ID:ENST00000542016Re-query CCDS DB by Protein ID:ENSP00000438504
Original member Current member NCBI NM_001308044.2 NP_001294973.1 Accepted alive Link to Nucleotide Sequence:NM_001308044.2Link to Protein Sequence:NP_001294973.1Re-query CCDS DB by Nucleotide ID:NM_001308044Re-query CCDS DB by Protein ID:NP_001294973Link to BLAST:NP_001294973.1
Original member Current member NCBI NM_001352762.2 NP_001339691.1 Accepted alive Link to Nucleotide Sequence:NM_001352762.2Link to Protein Sequence:NP_001339691.1Re-query CCDS DB by Nucleotide ID:NM_001352762Re-query CCDS DB by Protein ID:NP_001339691Link to BLAST:NP_001339691.1

Chromosomal Locations for CCDS 76658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22901730 22901733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22901814 22901883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22901980 22902099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22902187 22902382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22904261 22904326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22904875 22905012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22905094 22905246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22905336 22905398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGCAGTTAGCTGCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTCTGCTGTAGGCAAGGTTCGCG
ATGTACGTATCATCTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAATTCTGTGAAAT
CCAGTCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTACAGGCT
TCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCAATGGTGGACCAATGC
GCCTCTATGTGGGTTCCCTGCACTTCAATATCACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGG
TAAAATTGATAATATTGTCCTGATGAAGGACTCAGATACAGGCCGCTCTAAAGGTTATGGTTTCATCACG
TTCTCTGATTCTGAGTGTGCCCGGCGGGCCCTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTA
TGAGGGTTGGCCATGTGACTGAGCGACTGGATGGTGGCACAGACATCACTTTTCCTGATGGGGACCAGGA
GCTGGATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATGGCAAAACTGGCAGAAGGCGCTGGAATCCAA
CTGCCAAGCACTGCTGCTGCTGCTGCTGCCGCCGCCGCCCAGGCTGCTGCCTTGCAACTGAATGGAGCAG
TTCCCTTGGGGGCCCTGAATCCAGCAGCTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTCCCAGTG
TTTCCAGCTCTCCAGCCTCTTTACCCCCCAGACCATGTAA

Translation (269 aa):
MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQA
SQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFIT
FSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQ
LPSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPALNLASQCFQLSSLFTPQTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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