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Report for CCDS76677.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
76677.1 |
Public |
Homo sapiens |
14 |
FANCM |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:57697](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:76677.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:57697](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 76677.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000542564.6 |
ENSP00000442493.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000542564.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000442493.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000542564](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000442493](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001308133.2 |
NP_001295062.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001308133.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001295062.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001308133](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001295062](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001295062.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001295062.1 |
2022 |
Q8IYD8-3 |
2022 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 76677.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6069 nt): ATGAGCGGACGGCAAAGAACGCTTTTTCAGACGTGGGGCTCAAGTATCTCCCGATCATCTGGGACTCCGG GTTGCAGCTCCGGAACTGAGCGACCTCAGAGCCCTGGCAGCTCCAAGGCGCCTTTGCCAGCAGCAGCGGA GGCTCAGCTGGAGTCGGACGATGATGTGTTGCTTGTCGCGGCGTACGAGGCTGAGCGGCAGTTGTGTCTA GAGAATGGCGGGTTCTGCACCTCCGCGGGCGCCCTGTGGATTTACCCTACCAATTGCCCAGTGCGGGACT ACCAGCTGCACATTTCCCGGGCTGCTCTGTTTTGCAATACGCTGGTGTGTCTGCCTACCGGACTGGGAAA GACCTTTATTGCCGCCGTGGTCATGTACAATTTCTACCGCTGGTTCCCTTCAGGAAAGGTGGTCTTCATG GCCCCAACGAAACCCTTGGTGACACAGCAGATCGAGGCTTGCTACCAGGTGATGGGTATCCCGCAATCCC ACATGGCCGAAATGACAGGGTCTACACAAGCTTCCACCAGGAAGGAAATATGGTGCAGTAAGAGAGTGCT TTTTCTTACACCTCAGGTCATGGTAAATGACCTTTCTAGAGGAGCTTGTCCCGCTGCTGAAATAAAGTGT TTAGTTATTGATGAAGCTCATAAAGCTCTCGGAAACTATGCTTATTGCCAGGCTGTGCAACAAGTTATTA CTAACCTGCTAATTGGGCAGATAGAGCTTCGTTCTGAAGATTCTCCAGATATTTTGACATATTCTCATGA AAGAAAAGTTGAAAAGCTTATTGTTCCGCTTGGTGAAGAACTTGCAGCCATCCAAAAGACCTATATCCAG ATTTTGGAATCATTTGCTCGTTCTTTGATTCAGAGGAATGTTTTGATGAGAAGGGATATCCCAAATCTAA CAAAATATCAGATAATTCTGGCAAGAGATCAGTTTAGGAAAAACCCATCTCCGAATATTGTGGGAATACA ACAAGGCATAATCGAGGGAGAGTTTGCTATTTGTATTAGTTTATATCATGGTTATGAATTATTGCAGCAA ATGGGAATGAGATCATTATATTTCTTCCTTTGTGGAATTATGGATGGAACTAAAGGGATGACACGGTCAA AAAATGAACTTGGCCGAAATGAAGACTTCATGAAACTCTATAATCATCTAGAGTGTATGTTTGCACGTAC ACGTAGTACTTCAGCAAATGGTATTTCTGCTATCCAACAAGGAGATAAAAATAAAAAATTTGTTTATAGT CATCCAAAGTTAAAGAAATTAGAAGAAGTTGTAATTGAACACTTCAAGTCATGGAATGCTGAAAACACTA CTGAAAAGAAACGTGATGAGACCCGAGTTATGATCTTCTCTTCATTTCGAGATAGTGTTCAAGAAATTGC AGAAATGCTTTCACAGCATCAGCCAATTATTAGAGTAATGACTTTTGTCGGCCATGCCTCAGGGAAAAGC ACGAAGGGTTTTACCCAGAAGGAGCAACTGGAGGTAGTGAAACAGTTTCGTGACGGTGGTTACAACACGC TGGTTTCTACCTGTGTGGGTGAAGAAGGTTTGGATATAGGAGAAGTTGATCTTATAATATGTTTTGATTC CCAGAAGAGCCCAATTCGTCTTGTACAACGAATGGGTAGAACTGGCCGTAAACGTCAAGGCAGGATAGTT ATTATCCTTTCTGAAGGACGAGAGGAACGTATTTATAATCAGAGTCAGTCCAACAAAAGAAGTATATATA AAGCTATTTCAAGTAACAGGCAGGTCCTTCATTTTTACCAAAGAAGTCCACGAATGGTTCCTGATGGAAT CAACCCAAAATTACACAAAATGTTCATCACACATGGTGTCTATGAACCAGAGAAGCCTTCTCGGAACTTG CAGCGAAAGTCATCTATCTTTTCCTATAGGGATGGAATGAGGCAAAGTAGCCTAAAGAAAGATTGGTTCT TATCAGAAGAAGAATTTAAATTATGGAACAGACTTTATAGATTAAGGGACAGTGATGAAATTAAAGAGAT AACATTGCCTCAAGTTCAGTTTTCTTCTTTACAAAATGAGGAAAACAAACCAGCTCAAGAATCAACCACT GGAATTCATCAACTCTCTCTCTCTGAATGGAGACTGTGGCAAGATCATCCTTTGCCTACACATCAAGTTG ATCACTCAGATCGATGCCGCCATTTTATAGGCCTTATGCAAATGATAGAGGGAATGAGACACGAAGAGGG AGAATGCAGCTATGAATTGGAAGTTGAATCTTATTTACAAATGGAAGATGTTACCTCAACATTTATTGCT CCCAGGAATGAATCTAATAATCTTGCCAGTGACACCTTTATCACTCACAAGAAATCGTCATTTATAAAGA ACATAAATCAAGGCAGTTCATCCTCAGTGATAGAATCTGATGAAGAATGTGCTGAAATTGTTAAACAAAC TCATATCAAACCTACTAAAATTGTTTCTTTAAAGAAAAAAGTGTCTAAAGAAATAAAAAAAGATCAGCTT AAAAAAGAAAATAATCACGGTATTATAGATTCTGTAGATAATGACAGAAATTCCACTGTTGAAAATATTT TTCAAGAAGACCTACCAAATGATAAAAGGACATCAGATACAGATGAAATTGCTGCCACATGTACTATTAA TGAAAATGTTATTAAAGAACCGTGTGTGTTATTAACAGAGTGTCAGTTTACAAATAAATCCACTAGTTCA CTTGCTGGAAATGTTTTAGATTCTGGTTATAACAGTTTCAATGATGAAAAATCTGTTTCATCTAACTTAT TTCTTCCATTCGAAGAAGAGCTTTATATTGTTAGAACAGATGACCAATTTTATAATTGTCACTCATTGAC AAAAGAGGTACTAGCTAATGTAGAGAGATTTTTATCTTATTCTCCTCCGCCTCTCAGTGGACTCTCAGAC TTGGAATATGAAATTGCTAAGGGTACTGCACTTGAGAATTTGCTTTTCTTACCCTGTGCAGAGCATTTAC GAAGTGATAAATGCACCTGTTTGCTGTCACATTCAGCTGTGAATTCTCAACAGAATTTAGAATTGAATTC ACTTAAATGTATAAATTATCCATCTGAAAAAAGTTGCCTTTATGATATACCTAATGATAATATTTCTGAT GAGCCAAGTCTCTGTGACTGTGATGTACATAAACATAATCAAAATGAAAATTTAGTACCTAACAATCGTG TTCAAATACACAGAAGCCCTGCACAGAATTTAGTTGGAGAGAACAATCATGATGTTGATAACAGTGACCT CCCAGTATTGTCCACTGATCAAGATGAAAGTTTGCTGTTATTTGAAGATGTTAATACAGAGTTCGACGAT GTGAGTCTTTCACCCTTGAACAGTAAAAGCGAATCTTTACCTGTGTCAGACAAAACTGCTATTAGTGAAA CGCCTCTGGTCTCTCAGTTCTTAATTTCTGATGAACTTTTGTTGGACAATAATTCTGAACTCCAAGATCA AATCACCCGTGATGCTAATAGTTTTAAATCTCGTGATCAGAGAGGTGTACAGGAAGAAAAAGTGAAGAAT CATGAGGATATTTTTGATTGCTCTAGGGATTTATTTTCTGTTACCTTTGATTTAGGATTCTGTAGTCCAG ATTCTGATGATGAAATATTGGAACATACATCAGATAGCAATAGACCTCTAGATGATCTATATGGAAGGTA TTTGGAAATTAAGGAGATAAGTGATGCAAATTATGTTTCGAATCAAGCACTAATACCAAGAGATCATAGT AAAAATTTTACTAGTGGAACTGTTATTATCCCATCAAATGAAGATATGCAGAATCCAAATTATGTACATT TGCCACTGAGTGCAGCAAAAAATGAAGAATTGTTATCTCCTGGTTATTCTCAGTTTTCTTTACCAGTGCA AAAAAAAGTTATGAGTACACCACTCTCTAAATCAAACACATTGAACTCATTTTCTAAGATAAGAAAGGAA ATACTTAAGACACCAGATTCTAGTAAGGAAAAAGTAAACCTACAAAGATTCAAAGAAGCATTGAATTCAA CTTTTGATTATTCAGAATTTTCTCTAGAAAAGTCTAAAAGCAGTGGTCCAATGTATCTGCATAAATCCTG TCATTCTGTTGAAGATGGACAATTATTAACAAGTAACGAAAGTGAAGATGACGAGATTTTCCGAAGAAAA GTTAAAAGAGCAAAAGGAAATGTTTTAAACTCTCCTGAGGATCAGAAAAATAGTGAAGTTGATTCTCCAC TTCATGCTGTCAAAAAGCGCAGATTTCCTATAAACAGATCAGAATTATCATCTAGTGATGAGAGTGAGAA TTTTCCCAAACCATGTTCACAATTAGAAGACTTCAAGGTTTGTAACGGGAATGCCAGAAGAGGCATCAAA GTCCCAAAGAGACAGAGTCACTTAAAGCATGTAGCTAGGAAGTTTTTAGATGATGAAGCAGAACTTTCTG AAGAAGATGCAGAATATGTTTCATCAGATGAAAATGATGAGTCAGAAAATGAACAAGATTCCTCATTACT TGACTTTTTAAATGATGAAACTCAACTTTCACAGGCTATAAATGATTCTGAAATGAGAGCTATTTACATG AAATCTTTGCGTAGTCCAATGATGAACAATAAGTACAAAATGATTCATAAGACACATAAAAACATAAACA TTTTCTCGCAGATTCCTGAACAAGATGAAACCTATTTAGAGGATAGTTTTTGTGTTGATGAAGAGGAGTC TTGCAAAGGCCAATCAAGTGAAGAAGAAGTTTGTGTTGATTTTAACTTAATAACTGATGATTGCTTTGCA AATAGTAAAAAGTATAAAACTCGACGTGCAGTAATGCTAAAAGAAATGATGGAACAAAATTGTGCACATT CAAAAAAGAAATTATCCAGAATTATTTTACCAGATGATTCAAGTGAGGAGGAGAACAATGTAAATGATAA AAGAGAATCTAATATTGCGGTTAACCCAAGCACTGTTAAGAAGAACAAACAACAGGACCATTGTTTAAAT TCAGTGCCTTCTGGATCTTCTGCGCAGTCCAAGGTGCGTTCTACTCCAAGAGTTAATCCATTAGCAAAGC AGAGCAAACAGACATCGCTGAATTTAAAGGATACAATTTCCGAAGTCTCAGACTTCAAACCTCAGAATCA TAATGAAGTCCAGTCTACCACACCACCCTTCACTACTGTTGATTCACAGAAAGACTGTAGAAAATTTCCA GTTCCACAGAAGGATGGTAGTGCTTTGGAGGATTCTAGCACTTCAGGGGCATCCTGTTCCAAGTCAAGAC CACATTTAGCTGGGACACATACTTCTCTTAGACTTCCGCAGGAAGGAAAAGGAACCTGTATTCTTGTAGG TGGTCATGAAATCACTTCTGGATTAGAAGTAATTTCTTCCCTAAGAGCAATTCATGGGTTGCAAGTAGAA GTTTGTCCTCTTAATGGCTGTGATTACATCGTGAGTAATCGCATGGTGGTGGAAAGGAGGTCTCAATCTG AGATGTTAAATAGTGTCAATAAGAACAAGTTCATTGAGCAGATCCAGCACCTGCAGAGTATGTTTGAAAG AATATGTGTGATTGTGGAAAAGGACAGAGAAAAAACAGGAGACACATCAAGGATGTTTAGGAGAACAAAG AGCTATGACAGCCTGCTGACTACCTTAATTGGCGCTGGAATCCGAATTCTTTTCAGTTCCTGCCAAGAAG AAACCGCAGATTTGCTAAAGGAACTGTCTTTAGTGGAACAAAGAAAGAATGTTGGTATTCATGTTCCAAC AGTGGTGAATAGTAATAAAAGTGAGGCACTCCAGTTTTATTTAAGTATTCCCAATATAAGTTATATAACT GCATTAAATATGTGTCACCAGTTTTCATCTGTGAAAAGGATGGCTAACAGCTCACTTCAAGAAATCTCCA TGTATGCACAAGTAACTCATCAGAAGGCTGAGGAGATCTATAGATATATTCACTATGTATTTGACATACA AATGTTACCAAATGATCTTAACCAAGATAGACTGAAATCTGATATATAA
Translation (2022 aa): MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVAAYEAERQLCL ENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMYNFYRWFPSGKVVFM APTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEIWCSKRVLFLTPQVMVNDLSRGACPAAEIKC LVIDEAHKALGNYAYCQAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQ ILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGEFAICISLYHGYELLQQ MGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMFARTRSTSANGISAIQQGDKNKKFVYS HPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKS TKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIV IILSEGREERIYNQSQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNL QRKSSIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKPAQESTT GIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELEVESYLQMEDVTSTFIA PRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIVKQTHIKPTKIVSLKKKVSKEIKKDQL KKENNHGIIDSVDNDRNSTVENIFQEDLPNDKRTSDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSS LAGNVLDSGYNSFNDEKSVSSNLFLPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSD LEYEIAKGTALENLLFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISD EPSLCDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDVNTEFDD VSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANSFKSRDQRGVQEEKVKN HEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLYGRYLEIKEISDANYVSNQALIPRDHS KNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEELLSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKE ILKTPDSSKEKVNLQRFKEALNSTFDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRK VKRAKGNVLNSPEDQKNSEVDSPLHAVKKRRFPINRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIK VPKRQSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSEMRAIYM KSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSEEEVCVDFNLITDDCFA NSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNVNDKRESNIAVNPSTVKKNKQQDHCLN SVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKDTISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFP VPQKDGSALEDSSTSGASCSKSRPHLAGTHTSLRLPQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVE VCPLNGCDYIVSNRMVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTK SYDSLLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIPNISYIT ALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLNQDRLKSDI
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