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Report for CCDS76957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76957.1 Public Homo sapiens 17 ZNF18 24 110 108 CCDS HistoryNCBI Gene:7566Re-query CCDS DB by CCDS ID:76957.1Re-query CCDS DB by GeneID:7566See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454073.7 ENSP00000391376.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454073.7Link to Ensembl Protein Viewer:ENSP00000391376.3Re-query CCDS DB by Nucleotide ID:ENST00000454073Re-query CCDS DB by Protein ID:ENSP00000391376
Original member Current member NCBI NM_001303282.2 NP_001290211.1 Accepted alive Link to Nucleotide Sequence:NM_001303282.2Link to Protein Sequence:NP_001290211.1Re-query CCDS DB by Nucleotide ID:NM_001303282Re-query CCDS DB by Protein ID:NP_001290211Link to BLAST:NP_001290211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290211.1 548 P17022-2 548 100% 0 0

Chromosomal Locations for CCDS 76957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 11977957 11978744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11983297 11983404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11984113 11984197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11990462 11990550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11990974 11991163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11992443 11992829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGCCCGTTGACTTGGGGCAGGCCCTAGGCCTGCTGCCATCGCTGGCGAAGGCCGAGGACTCCCAGTTCT
CAGAATCAGATGCTGCCCTTCAAGAGGAACTCTCCAGCCCTGAGACCGCACGCCAGCTTTTCAGGCAGTT
CCGTTACCAGGTGATGTCTGGGCCTCATGAGACCTTGAAGCAACTTCGGAAGCTCTGTTTCCAGTGGCTA
CAGCCAGAGGTTCACACCAAAGAGCAGATCCTAGAGATCCTCATGTTGGAGCAGTTTCTGACCATCCTGC
CTGGGGAGATCCAGATGTGGGTGCGGAAACAGTGTCCAGGAAGTGGAGAAGAGGCAGTGACCCTTGTGGA
AAGCTTGAAGGGGGACCCCCAGAGACTGTGGCAATGGATCAGTATCCAGGTTCTAGGACAGGACATCTTA
TCAGAGAAGATGGAATCTCCAAGCTGCCAAGTGGGGGAAGTGGAGCCCCATCTTGAAGTGGTGCCTCAGG
AGTTGGGACTTGAGAATTCATCCTCAGGGCCTGGGGAGCTTCTGAGCCACATCGTGAAAGAGGAATCTGA
CACAGAAGCAGAACTAGCCCTGGCTGCCTCCCAGCCTGCCCGACTGGAGGAAAGGCTGATCAGAGACCAG
GACCTCGGAGCCTCACTGCTCCCAGCAGCACCTCAGGAACAGTGGAGACAACTGGATTCCACTCAAAAGG
AGCAATACTGGGATCTCATGCTGGAGACCTATGGGAAAATGGTCTCAGGAGGCATTTCCCATCCCAAATC
TGACCTGACTAATTCAATAGAATTTGGGGAAGAGCTGGCAGGAATATACCTTCATGTCAATGAGAAGATC
CCAAGACCCACCTGCATAGGAGATAGACAAGAGAATGACAAGGAGAACCTAAATTTGGAGAATCACAGGG
ACCAGGAGCTCCTGCATGCTTCCTGTCAAGCTTCAGGAGAGGTTCCTTCTCAGGCTTCCTTGAGGGGCTT
CTTCACTGAGGATGAGCCAGGATGCTTTGGAGAAGGAGAGAATCTCCCTGAGGCTCTGCAAAACATTCAG
GATGAGGGAACAGGGGAACAGCTGTCTCCTCAAGAAAGGATTTCTGAGAAACAACTAGGTCAGCATTTGC
CTAATCCTCATTCAGGAGAAATGTCCACCATGTGGCTTGAGGAGAAGAGAGAGACCTCCCAGAAGGGGCA
GCCAAGAGCCCCCATGGCCCAGAAGCTCCCCACCTGCAGGGAGTGTGGGAAGACCTTTTATAGGAATTCT
CAGCTTATTTTTCACCAAAGAACTCACACCGGAGAGACATACTTTCAGTGCACCATCTGCAAAAAAGCCT
TTCTGCGGAGTTCAGACTTTGTGAAGCATCAGAGAACTCACACGGGAGAGAAGCCCTGTAAATGTGATTA
CTGTGGGAAAGGCTTTAGTGACTTCTCAGGATTGCGCCACCACGAGAAAATCCACACAGGAGAGAAACCC
TATAAATGTCCTATCTGTGAGAAAAGTTTCATTCAGAGATCAAACTTTAATAGACATCAGAGGGTTCACA
CTGGAGAGAAACCTTATAAATGTTCGCACTGTGGGAAAAGTTTCAGCTGGAGCTCGAGCCTTGACAAACA
TCAAAGATCCCACTTAGGAAAGAAGCCCTTTCAATAG

Translation (548 aa):
MPVDLGQALGLLPSLAKAEDSQFSESDAALQEELSSPETARQLFRQFRYQVMSGPHETLKQLRKLCFQWL
QPEVHTKEQILEILMLEQFLTILPGEIQMWVRKQCPGSGEEAVTLVESLKGDPQRLWQWISIQVLGQDIL
SEKMESPSCQVGEVEPHLEVVPQELGLENSSSGPGELLSHIVKEESDTEAELALAASQPARLEERLIRDQ
DLGASLLPAAPQEQWRQLDSTQKEQYWDLMLETYGKMVSGGISHPKSDLTNSIEFGEELAGIYLHVNEKI
PRPTCIGDRQENDKENLNLENHRDQELLHASCQASGEVPSQASLRGFFTEDEPGCFGEGENLPEALQNIQ
DEGTGEQLSPQERISEKQLGQHLPNPHSGEMSTMWLEEKRETSQKGQPRAPMAQKLPTCRECGKTFYRNS
QLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSGLRHHEKIHTGEKP
YKCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSHLGKKPFQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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