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Report for CCDS77175.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77175.1 Public Homo sapiens 18 ZNF24 24 110 108 CCDS HistoryNCBI Gene:7572Re-query CCDS DB by CCDS ID:77175.1Re-query CCDS DB by GeneID:7572See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77175.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589881.5 ENSP00000467655.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589881.5Link to Ensembl Protein Viewer:ENSP00000467655.1Re-query CCDS DB by Nucleotide ID:ENST00000589881Re-query CCDS DB by Protein ID:ENSP00000467655
Original member Current member NCBI NM_001308123.2 NP_001295052.1 Accepted alive Link to Nucleotide Sequence:NM_001308123.2Link to Protein Sequence:NP_001295052.1Re-query CCDS DB by Nucleotide ID:NM_001308123Re-query CCDS DB by Protein ID:NP_001295052Link to BLAST:NP_001295052.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295052.1 193 P17028-2 193 100% 0 0

Chromosomal Locations for CCDS 77175.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 35339060 35339073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 35339829 35339976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 35340231 35340650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGTCTGCACAGTCAGTGGAAGAAGATTCAATACTTATCATCCCAACTCCAGATGAAGAGGAAAAAATTC
TGAGAGTGAAGTTGGAGGAGGATCCTGATGGCGAAGAGGGATCAAGTATCCCCTGGAACCATCTCCCAGA
CCCAGAGATTTTCCGACAGCGATTCAGGCAGTTTGGATACCAGGATTCACCTGGGCCCCGTGAGGCTGTG
AGCCAGCTCCGAGAACTTTGCCGTCTGTGGCTCAGGCCAGAGACGCACACAAAAGAACAAATCTTGGAGC
TGGTAGTGCTGGAGCAGTTTGTTGCCATCCTACCCAAAGAGCTACAGACTTGGGTTCGAGATCATCATCC
AGAGAATGGAGAGGAGGCAGTGACAGTGCTGGAGGATTTGGAGAGTGAACTTGATGACCCTGGACAACCG
GTTTCTCTCCGTCGACGAAAACGGGAAGTACTAGTAGAAGACATGGTATCTCAAGAAGAAGCTCAGGGAT
TACCAAGTTCTGAGCTTGATGCTGTGGAGAACCAGCTCAAGTGGGCATCCTGGGAGCTCCATTCCCTAAG
GCACTGTGTAATCATTCCTTGA

Translation (193 aa):
MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGYQDSPGPREAV
SQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVTVLEDLESELDDPGQP
VSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWASWELHSLRHCVIIP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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