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Report for CCDS77200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77200.1 Public Homo sapiens 18 SMIM21 24 110 108 CCDS HistoryNCBI Gene:284274Re-query CCDS DB by CCDS ID:77200.1Re-query CCDS DB by GeneID:284274See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77200.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000584508.1 ENSP00000462572.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000584508.1Link to Ensembl Protein Viewer:ENSP00000462572.1Re-query CCDS DB by Nucleotide ID:ENST00000584508Re-query CCDS DB by Protein ID:ENSP00000462572
Original member Current member NCBI NM_001303482.2 NP_001290411.1 Accepted alive Link to Nucleotide Sequence:NM_001303482.2Link to Protein Sequence:NP_001290411.1Re-query CCDS DB by Nucleotide ID:NM_001303482Re-query CCDS DB by Protein ID:NP_001290411Link to BLAST:NP_001290411.1

Chromosomal Locations for CCDS 77200.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 75418189 75418192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 75418786 75418916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 75427435 75427563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGGACCAGTATGTGTCCACAGCTCCTCCCCGATTCCCTATAGCACAGCTGGGAACATTTAAACAAGACT
CTGCAGGAATGGGACGGATATTCAAGGGGAATTTGCTGCAGAAGAAAGCACTTACCACATTTGAAAATGA
ACACCATATTCGTTTCTTCACATTGTTGGTTCTTTTCCATGTGATGGTGTTGCTGAGGAATCATAGCAGG
ATACAAGGGGTTTCTGAAGACTGGAAAAGGGCCAACAGCATATTTCGAAAGTAA

Translation (87 aa):
MDQYVSTAPPRFPIAQLGTFKQDSAGMGRIFKGNLLQKKALTTFENEHHIRFFTLLVLFHVMVLLRNHSR
IQGVSEDWKRANSIFRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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