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Report for CCDS77249.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77249.1 Public Homo sapiens 19 AKAP8L 24 110 108 CCDS HistoryNCBI Gene:26993Re-query CCDS DB by CCDS ID:77249.1Re-query CCDS DB by GeneID:26993See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77249.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595465.6 ENSP00000470952.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595465.6Link to Ensembl Protein Viewer:ENSP00000470952.1Re-query CCDS DB by Nucleotide ID:ENST00000595465Re-query CCDS DB by Protein ID:ENSP00000470952
Original member Current member NCBI NM_001291478.2 NP_001278407.1 Accepted alive Link to Nucleotide Sequence:NM_001291478.2Link to Protein Sequence:NP_001278407.1Re-query CCDS DB by Nucleotide ID:NM_001291478Re-query CCDS DB by Protein ID:NP_001278407Link to BLAST:NP_001278407.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278407.1 585 Q9ULX6-2 585 100% 0 0

Chromosomal Locations for CCDS 77249.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15380122 15380430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15380517 15380612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397150 15397280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397520 15397625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15397714 15397855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15399302 15399410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400295 15400358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400794 15400864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15400947 15401043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15401150 15401603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15403658 15403715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15404010 15404042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15410520 15410594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15418911 15418923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGAGCTACACAGGCTTTGTCCAGGGATCTGAAACCACTTTGCAGTCGACATACTCGGATACCAGCGCTC
AGCCCACCTGTGATTATGGATATGGAACTTGGAACTCTGGGACAAATAGAGGCTACGAGGGCTATGGCTA
TGGCTATGGCTATGGCCAGGATAACACCACCAACTATGGGTATGACTCTTATGAGTCCTGCGACTCGAGG
GCCGTCCTGAGTGAGCGCGACCTGTACCGGTCAGGCTATGACTACAGCGAGCTTGACCCTGAGATGGAAA
TGGCCTATGAGGGCCAATACGATGCCTACCGCGACCAGTTCCGCATGCGTGGCAACGACACCTTCGGTCC
CAGGGCACAGGGCTGGGCCCGGGATGCCCGGAGCGGCCGGCCAATGGCCTCAGGCTATGGGCGCATGTGG
GAAGACCCCATGGGGGCCCGGGGCCAGTGCATGTCTGGTGCCTCTCGGCTGCCCTCCCTCTTCTCCCAGA
ACATCATCCCCGAGTACGGCATGTTCCAGGGCATGCGAGGTGGGGGCGCCTTCCCGGGCGGCTCCCGCTT
TGGTTTCGGGTTTGGCAATGGCATGAAGCAGATGAGGCGGACCTGGAAGACCTGGACCACAGCCGACTTC
CGAACCAAGAAGAAGAAGAGAAAGCAGGGCGGCAGTCCTGATGAGCCAGATAGCAAAGCCACCCGCACGG
ACTGCTCGGACAACAGCGACTCAGACAATGATGAGGGCACCGAGGGGGAAGCCACAGAGGGCCTTGAAGG
CACCGAGGCTGTGGAGAAGGGCTCCAGAGTGGACGGAGAGGATGAGGAGGGAAAAGAGGATGGGAGAGAA
GAAGGCAAAGAGGATCCAGAGAAGGGGGCCCTAACCACCCAGGATGAAAATGGCCAGACCAAGCGCAAGT
TGCAGGCAGGCAAGAAGAGTCAGGACAAGCAGAAAAAGCGGCAGCGAGACCGCATGGTGGAAAGGATCCA
GTTTGTGTGTTCTCTGTGCAAATACCGGACCTTCTATGAGGACGAGATGGCCAGCCATCTTGACAGCAAG
TTCCACAAGGAACACTTTAAGTACGTAGGCACCAAGCTCCCTAAGCAGACGGCTGACTTTCTGCAGGAGT
ACGTCACTAACAAGACCAAGAAGACAGAGGAGCTCCGAAAAACCGTGGAGGACCTTGATGGCCTCATCCA
GCAAATCTACAGAGACCAGGATCTGACCCAGGAAATTGCCATGGAGCATTTTGTGAAGAAGGTGGAGGCA
GCCCATTGTGCAGCCTGCGACCTCTTCATTCCCATGCAGTTTGGGATCATCCAGAAGCATCTGAAGACCA
TGGATCACAACCGGAACCGCAGGCTCATGATGGAGCAGTCCAAGAAGTCCTCCCTCATGGTGGCCCGCAG
TATTCTCAACAACAAGCTCATCAGCAAGAAGCTGGAGCGCTACCTGAAGGGCGAGAACCCTTTCACCGAC
AGCCCCGAGGAGGAGAAGGAGCAGGAGGAGGCTGAGGGCGGTGCCCTGGACGAGGGGGCGCAGGGCGAAG
CGGCAGGGATCTCGGAGGGCGCAGAGGGCGTGCCGGCGCAGCCTCCCGTGCCCCCAGAGCCAGCCCCCGG
GGCCGTGTCGCCGCCACCGCCGCCGCCCCCAGAGGAGGAGGAGGAGGGCGCCGTGCCCTTGCTGGGAGGG
GCGCTGCAACGCCAGATCCGCGGCATCCCGGGCCTCGACGTGGAGGACGACGAGGAGGGCGGCGGGGGCG
CCCCGTGA

Translation (585 aa):
MSYTGFVQGSETTLQSTYSDTSAQPTCDYGYGTWNSGTNRGYEGYGYGYGYGQDNTTNYGYDSYESCDSR
AVLSERDLYRSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRAQGWARDARSGRPMASGYGRMW
EDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGGAFPGGSRFGFGFGNGMKQMRRTWKTWTTADF
RTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGRE
EGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSK
FHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIQQIYRDQDLTQEIAMEHFVKKVEA
AHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFTD
SPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGG
ALQRQIRGIPGLDVEDDEEGGGGAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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