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Report for CCDS77680.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77680.1 Public Homo sapiens 22 CCDC134 24 110 108 CCDS HistoryNCBI Gene:79879Re-query CCDS DB by CCDS ID:77680.1Re-query CCDS DB by GeneID:79879See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77680.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402061.7 ENSP00000385803.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402061.7Link to Ensembl Protein Viewer:ENSP00000385803.3Re-query CCDS DB by Nucleotide ID:ENST00000402061Re-query CCDS DB by Protein ID:ENSP00000385803
Original member Current member NCBI NM_001304797.2 NP_001291726.1 Accepted alive Link to Nucleotide Sequence:NM_001304797.2Link to Protein Sequence:NP_001291726.1Re-query CCDS DB by Nucleotide ID:NM_001304797Re-query CCDS DB by Protein ID:NP_001291726Link to BLAST:NP_001291726.1

Chromosomal Locations for CCDS 77680.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 41808891 41808993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41809879 41810000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41825698 41825823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGACCTTCTTCAATTCCTGGCCTTCCTCTTTGTCCTGCTTTTGTCTGGGATGGGAGCCACAGGCACCT
TGAGGACCTCCCTGGACCCAAGCCTGGAGATCTACAAGAAGATGTTTGAGGTGAAGCGGCGGGAGCAGCT
GTTGGCACTGAAGAACCTGGCACAGCTGAACGACATCCACCAGCAGTACAAGATCCTTGATGTCATGCTC
AAGGGGCTCTTTAAGTTCATTCCCAGCACTGACCCTTTCCAGAAGGCCCTGAGAGAAGAAGAGAAACGCC
GAAAGAAAGAGGAGAAGCGGAAGGAGATCCGAAAAGGCCCAAGGATCTCCAGATCCCAGTCTGAGTTATA
G

Translation (116 aa):
MDLLQFLAFLFVLLLSGMGATGTLRTSLDPSLEIYKKMFEVKRREQLLALKNLAQLNDIHQQYKILDVML
KGLFKFIPSTDPFQKALREEEKRRKKEEKRKEIRKGPRISRSQSEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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