NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS77780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77780.1 Public Homo sapiens 3 CEP97 24 110 108 CCDS HistoryNCBI Gene:79598Re-query CCDS DB by CCDS ID:77780.1Re-query CCDS DB by GeneID:79598See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000494050.5 ENSP00000418185.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000494050.5Link to Ensembl Protein Viewer:ENSP00000418185.1Re-query CCDS DB by Nucleotide ID:ENST00000494050Re-query CCDS DB by Protein ID:ENSP00000418185
Original member Current member NCBI NM_001303401.2 NP_001290330.1 Accepted alive Link to Nucleotide Sequence:NM_001303401.2Link to Protein Sequence:NP_001290330.1Re-query CCDS DB by Nucleotide ID:NM_001303401Re-query CCDS DB by Protein ID:NP_001290330Link to BLAST:NP_001290330.1

Chromosomal Locations for CCDS 77780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101724677 101724719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101726594 101726736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101727383 101727541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101728836 101728937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101731840 101731953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101732488 101732654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101755430 101755594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757063 101757196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757811 101758423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101762485 101762560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101764847 101765551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2421 nt):
ATGGCGGTGGCGCGCGTGGACGCGGCTTTGCCTCCCGGAGAAGGATCAGTGGTCAATTGGTCAGGACAGG
GACTACAGAAATTAGGTCCAAATTTACCCTGTGAAGCTGATATTCACACTTTGATTCTGGATAAAAATCA
GATTATTAAATTGGAAAATCTGGAGAAATGCAAACGATTAATACAGTTATCAGTAGCTAATAATCGGCTG
GTTCGGATGATGGGTGTGGCCAAGCTGACGTTGCTTCGTGTATTAAATTTGCCTCATAATAGCATTGGCT
GTGTGGAAGGGCTAAAGGAACTAGTACATCTGGAATGGCTGAATTTGGCAGGAAATAATCTTAAGGCCAT
GGAACAGATCAATAGCTGCACAGCTCTACAGCATCTCGATTTATCAGACAATAATATATCCCAGATAGGT
GATCTATCTAAATTGGTATCCCTGAAAACCCTGCTTTTACATGGAAACATCATCACCTCTCTTAGAATGG
CACCTGCTTACCTACCCAGAAGTCTTGCTATACTTTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGA
GATCTCTTTTTTGGCATCCTTAACTGAATTGGAACAGTTGTCGATTATGAACAATCCTTGTGTGATGGCA
ACACCATCCATCCCAGGATTTGACTATCGGCCGTACATCGTCAGCTGGTGCCTAAACCTCAGAGTCCTAG
ATGGATATGTGATTTCTCAGAAGGAAAGTTTGAAAGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGAGC
ATATCGGCCTGGCCAGCACATCCAGCTTGTCCAATATCTGGCTACAGTCTGCCCCCTCACTTCTACACTA
GGTCTTCAAACTGCAGAGGATGCCAAACTAGAGAAGATTTTGAGCAAACAGAGGTTTCACCAGAGGCAGT
TGATGAACCAAAGCCAAAATGAAGAGTTGTCTCCTCTTGTTCCTGTTGAAACAAGGGCATCCCTTATTCC
TGAGCATTCAAGCCCTGTTCAAGATTGCCAGATATCCCAGGAAAGTGAGTCTACTTTTATGCCAGTTGCA
TCAGGACTGTCTCCACTATCACCTACAGTTGAGCTGAGGCTGCAGGGCATTAACTTGGGCCTAGAAGATG
ATGGTGTTGCAGATGAATCTGTGAAAGGGCTGGAAAGCCAGGTGTTGGATAAGGAAGAGGAACAGCCTTT
ATGGGCTGCAAATGAGAATTCTGTTCAAATGATGAGAAGTGAAATCAATACAGAGGTAAATGAGAAAGCT
GGACTATTACCTTGTCCTGAGCCAACAATAATCAGTGCTATCTTGAAGGATGATAACCACAGTCTTACAT
TTTTTCCTGAGTCAACTGAGCAGAAACAATCAGACATAAAGAAACCAGAAAATACACAACCAGAAAATAA
AGAAACCATATCTCAAGCAACTTCAGAGAAACTTCCCATGATTTTAACCCAGAGATCTGTTGCTTTGGGA
CAAGACAAAGTTGCCCTTCAGAAATTAAATGATGCAGCCACCAAGCTTCAGGCCTGTTGGCGGGGATTTT
ATGCCAGGAACTACAACCCTCAAGCCAAAGATGTGCGTTACGAAATCCGGCTACGCAGAATGCAAGAGCA
CATTGTCTGCTTAACTGATGAAATAAGGAGATTACGAAAAGAAAGAGATGAAGAACGTATTAAAAAATTT
GTACAAGAAGAAGCTTTCAGATTCCTTTGGAACCAGGTAAGGTCTCTACAGGTTTGGCAACAGACAGTGG
ACCAGCGTCTAAGTTCCTGGCATACTGATGTTCCTCCTATATCAAGTACTCTTGTGCCATCGAAACATCC
ATTATTTACCCAAAGCCAGGAGTCCTCTTGTGATCAAAATGCTGATTGGTTTATTGCTTCTGATGTAGCT
CCTCAAGAGAAATCATTACCAGAATTTCCAGACTCTGGTTTTCATTCCTCTCTAACAGAACAAGTTCATT
CATTGCAGCATTCTTTGGATTTTGAGAAAAGTTCCACAGAAGGCAGTGAAAGCTCCATAATGGGGAATTC
CATTGACACAGTCAGATATGGCAAAGAATCAGATTTAGGGGATGTTAGTGAAGAACATGGTGAATGGAAT
AAGGAAAGCTCAAATAACGAGCAGGACAATAGTCTGCTTGAACAGTATTTAACTTCAGTTCAACAGCTGG
AAGATGCTGATGAGAGGACCAATTTTGATACAGAGACAAGAGATAGCAAACTTCACATTGCTTGTTTCCC
AGTACAGTTAGATACATTGTCTGACGGTGCTTCTGTAGATGAGAGTCATGGCATATCTCCTCCTTTGCAA
GGTGAAATTAGCCAGACACAAGAGAATTCTAAATTAAATGCAGAAGTTCAGGGGCAGCAGCCAGAATGTG
ATTCTACATTTCAGCTATTGCATGTTGGTGTTACTGTGTAG

Translation (806 aa):
MAVARVDAALPPGEGSVVNWSGQGLQKLGPNLPCEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRL
VRMMGVAKLTLLRVLNLPHNSIGCVEGLKELVHLEWLNLAGNNLKAMEQINSCTALQHLDLSDNNISQIG
DLSKLVSLKTLLLHGNIITSLRMAPAYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMA
TPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQGKGRAYRPGQHIQLVQYLATVCPLTSTL
GLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPLVPVETRASLIPEHSSPVQDCQISQESESTFMPVA
SGLSPLSPTVELRLQGINLGLEDDGVADESVKGLESQVLDKEEEQPLWAANENSVQMMRSEINTEVNEKA
GLLPCPEPTIISAILKDDNHSLTFFPESTEQKQSDIKKPENTQPENKETISQATSEKLPMILTQRSVALG
QDKVALQKLNDAATKLQACWRGFYARNYNPQAKDVRYEIRLRRMQEHIVCLTDEIRRLRKERDEERIKKF
VQEEAFRFLWNQVRSLQVWQQTVDQRLSSWHTDVPPISSTLVPSKHPLFTQSQESSCDQNADWFIASDVA
PQEKSLPEFPDSGFHSSLTEQVHSLQHSLDFEKSSTEGSESSIMGNSIDTVRYGKESDLGDVSEEHGEWN
KESSNNEQDNSLLEQYLTSVQQLEDADERTNFDTETRDSKLHIACFPVQLDTLSDGASVDESHGISPPLQ
GEISQTQENSKLNAEVQGQQPECDSTFQLLHVGVTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH