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Report for CCDS77871.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77871.1 Public Homo sapiens 3 FETUB 24 110 108 CCDS HistoryNCBI Gene:26998Re-query CCDS DB by CCDS ID:77871.1Re-query CCDS DB by GeneID:26998See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77871.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382134.7 ENSP00000371569.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382134.7Link to Ensembl Protein Viewer:ENSP00000371569.3Re-query CCDS DB by Nucleotide ID:ENST00000382134Re-query CCDS DB by Protein ID:ENSP00000371569
Original member Current member NCBI NM_001308079.4 NP_001295008.1 Accepted alive Link to Nucleotide Sequence:NM_001308079.4Link to Protein Sequence:NP_001295008.1Re-query CCDS DB by Nucleotide ID:NM_001308079Re-query CCDS DB by Protein ID:NP_001295008Link to BLAST:NP_001295008.1

Chromosomal Locations for CCDS 77871.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 186640461 186640689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 186644751 186644920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 186646248 186646349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 186651218 186651301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 186652263 186652631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGGGTCTGCTCCTTCCCCTGGCACTCTGCATCCTAGTCCTGTGCTGCGGAGCAATGTCTCCACCCCAGC
TGGCCCTCAACCCCTCGGCTCTGCTCTCCCGGGGCTGCAATGACTCAGATGTGCTGGCAGTTGCAGGCTT
TGCCCTGCGGGATATTAACAAAGACAGAAAGGATGGCTATGTGCTGAGACTCAACCGAGTGAACGACGCC
CAGGAATACAGACGGGCAATTTCAAAAAAAAAGATTTACATGACGTGCCCTGACTGCCCAAGCTCCATAC
CCACTGACTCTTCCAATCACCAAGTGCTGGAGGCTGCCACCGAGTCTCTTGCGAAATACAACAATGAGAA
CACATCCAAGCAGTATTCTCTCTTCAAAGTCACCAGGGCTTCTAGCCAGTGGGTGGTCGGCCCTTCTTAC
TTTGTGGAATACTTAATTAAAGAATCACCATGTACTAAATCCCAGGCCAGCAGCTGTTCACTTCAGTCCT
CCGACTCTGTGCCTGTTGGTCTTTGCAAAGGTTCTCTGACTCGAACACACTGGGAAAAGTTTGTCTCTGT
GACTTGTGACTTCTTTGAATCACAGGCTCCAGCCACTGGAAGTGAAAACTCTGCTGTTAACCAGAAACCT
ACAAACCTTCCCAAGGTGGAAGAATCCCAGCAGAAAAACACCCCCCCAACAGACTCCCCCTCCAAAGCTG
GGCCAAGAGGATCTGTCCAATATCTTCCTGACTTGGATGATAAAAATTCCCAGGAAAAGGGCCCTCAGGA
GGCCTTTCCTGTGCATCTGGACCTAACCACGAATCCCCAGGGAGAAACCCTGGATATTTCCTTCCTCTTC
CTGGAGCCTATGGAGGAGAAGCTGGTGGTCCTGCCTTTCCCCAAAGAAAAAGCACGCACTGCTGAGTGCC
CAGGGCCAGCCCAGAATGCCAGCCCTCTTGTCCTTCCGCCATGA

Translation (317 aa):
MGLLLPLALCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGYVLRLNRVNDA
QEYRRAISKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNNENTSKQYSLFKVTRASSQWVVGPSY
FVEYLIKESPCTKSQASSCSLQSSDSVPVGLCKGSLTRTHWEKFVSVTCDFFESQAPATGSENSAVNQKP
TNLPKVEESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFLF
LEPMEEKLVVLPFPKEKARTAECPGPAQNASPLVLPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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