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Report for CCDS7830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7830.1 Public Homo sapiens 11 MRGPRX3 24 110 108 CCDS HistoryNCBI Gene:117195Re-query CCDS DB by CCDS ID:7830.1Re-query CCDS DB by GeneID:117195See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7830.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396275.2 ENSP00000379571.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396275.2Link to Ensembl Protein Viewer:ENSP00000379571.2Re-query CCDS DB by Nucleotide ID:ENST00000396275Re-query CCDS DB by Protein ID:ENSP00000379571
Original member Current member EBI ENST00000621697.2 ENSP00000481943.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621697.2Link to Ensembl Protein Viewer:ENSP00000481943.1Re-query CCDS DB by Nucleotide ID:ENST00000621697Re-query CCDS DB by Protein ID:ENSP00000481943
Original member Current member NCBI NM_001370464.1 NP_001357393.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370464.1Link to Protein Sequence:NP_001357393.1Re-query CCDS DB by Nucleotide ID:NM_001370464Re-query CCDS DB by Protein ID:NP_001357393Link to BLAST:NP_001357393.1
Original member Current member NCBI NM_054031.4 NP_473372.3 Accepted alive Link to Nucleotide Sequence:NM_054031.4Link to Protein Sequence:NP_473372.3Re-query CCDS DB by Nucleotide ID:NM_054031Re-query CCDS DB by Protein ID:NP_473372Link to BLAST:NP_473372.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357393.1 322 Q96LB0 322 100% 0 0
NP_473372.3 322 Q96LB0 322 100% 0 0

Chromosomal Locations for CCDS 7830.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 18137203 18138171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGATTCAACCATCCCAGTCTTGGGTACAGAACTGACACCAATCAACGGACGTGAGGAGACTCCTTGCT
ACAAGCAGACCCTGAGCTTCACGGGGCTGACGTGCATCGTTTCCCTTGTCGCGCTGACAGGAAACGCGGT
TGTGCTCTGGCTCCTGGGCTGCCGCATGCGCAGGAACGCTGTCTCCATCTACATCCTCAACCTGGTCGCG
GCCGACTTCCTCTTCCTTAGCGGCCACATTATATGTTCGCCGTTACGCCTCATCAATATCCGCCATCCCA
TCTCCAAAATCCTCAGTCCTGTGATGACCTTTCCCTACTTTATAGGCCTAAGCATGCTGAGCGCCATCAG
CACCGAGCGCTGCCTGTCCATCCTGTGGCCCATCTGGTACCACTGCCGCCGCCCCAGATACCTGTCATCA
GTCATGTGTGTCCTGCTCTGGGCCCTGTCCCTGCTGCGGAGTATCCTGGAGTGGATGTTCTGTGACTTCC
TGTTTAGTGGTGCTAATTCTGTTTGGTGTGAAACGTCAGATTTCATTACAATCGCGTGGCTGGTTTTTTT
ATGTGTGGTTCTCTGTGGGTCCAGCCTGGTCCTGCTGGTCAGGATTCTCTGTGGATCCCGGAAGATGCCG
CTGACCAGGCTGTACGTGACCATCCTCCTCACAGTGCTGGTCTTCCTCCTCTGTGGCCTGCCCTTTGGCA
TTCAGTGGGCCCTGTTTTCCAGGATCCACCTGGATTGGAAAGTCTTATTTTGTCATGTGCATCTAGTTTC
CATTTTCCTGTCCGCTCTTAACAGCAGTGCCAACCCCATCATTTACTTCTTCGTGGGCTCCTTTAGGCAG
CGTCAAAATAGGCAGAACCTGAAGCTGGTTCTCCAGAGGGCTCTGCAGGACACGCCTGAGGTGGATGAAG
GTGGAGGGTGGCTTCCTCAGGAAACCCTGGAGCTGTCGGGAAGCAGATTGGAGCAGTGA

Translation (322 aa):
MDSTIPVLGTELTPINGREETPCYKQTLSFTGLTCIVSLVALTGNAVVLWLLGCRMRRNAVSIYILNLVA
ADFLFLSGHIICSPLRLINIRHPISKILSPVMTFPYFIGLSMLSAISTERCLSILWPIWYHCRRPRYLSS
VMCVLLWALSLLRSILEWMFCDFLFSGANSVWCETSDFITIAWLVFLCVVLCGSSLVLLVRILCGSRKMP
LTRLYVTILLTVLVFLLCGLPFGIQWALFSRIHLDWKVLFCHVHLVSIFLSALNSSANPIIYFFVGSFRQ
RQNRQNLKLVLQRALQDTPEVDEGGGWLPQETLELSGSRLEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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