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Report for CCDS7870.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7870.1 Public Homo sapiens 11 MPPED2 24 110 108 CCDS HistoryNCBI Gene:744Re-query CCDS DB by CCDS ID:7870.1Re-query CCDS DB by GeneID:744See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7870.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358117.10 ENSP00000350833.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358117.10Link to Ensembl Protein Viewer:ENSP00000350833.4Re-query CCDS DB by Nucleotide ID:ENST00000358117Re-query CCDS DB by Protein ID:ENSP00000350833
Original member Current member NCBI NM_001377952.1 NP_001364881.1 Accepted alive Link to Nucleotide Sequence:NM_001377952.1Link to Protein Sequence:NP_001364881.1Re-query CCDS DB by Nucleotide ID:NM_001377952Re-query CCDS DB by Protein ID:NP_001364881Link to BLAST:NP_001364881.1
Original member Current member NCBI NM_001377953.1 NP_001364882.1 Accepted alive Link to Nucleotide Sequence:NM_001377953.1Link to Protein Sequence:NP_001364882.1Re-query CCDS DB by Nucleotide ID:NM_001377953Re-query CCDS DB by Protein ID:NP_001364882Link to BLAST:NP_001364882.1
Original member Current member NCBI NM_001377954.1 NP_001364883.1 Accepted alive Link to Nucleotide Sequence:NM_001377954.1Link to Protein Sequence:NP_001364883.1Re-query CCDS DB by Nucleotide ID:NM_001377954Re-query CCDS DB by Protein ID:NP_001364883Link to BLAST:NP_001364883.1
Original member Current member NCBI NM_001377955.1 NP_001364884.1 Accepted alive Link to Nucleotide Sequence:NM_001377955.1Link to Protein Sequence:NP_001364884.1Re-query CCDS DB by Nucleotide ID:NM_001377955Re-query CCDS DB by Protein ID:NP_001364884Link to BLAST:NP_001364884.1
Original member Current member NCBI NM_001584.3 NP_001575.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001584.3Link to Protein Sequence:NP_001575.1Re-query CCDS DB by Nucleotide ID:NM_001584Re-query CCDS DB by Protein ID:NP_001575Link to BLAST:NP_001575.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364881.1 294 Q15777-1 294 100% 0 0
NP_001364882.1 294 Q15777-1 294 100% 0 0
NP_001364883.1 294 Q15777-1 294 100% 0 0
NP_001364884.1 294 Q15777-1 294 100% 0 0
NP_001575.1 294 Q15777-1 294 100% 0 0

Chromosomal Locations for CCDS 7870.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 30411468 30411586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30414228 30414341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30417518 30417633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30495296 30495521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30535994 30536175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 30580246 30580373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGGCACATGGGATTCCTTCTCAAGGCAAAGTTACCATAACGGTGGATGAGTACAGCTCAAACCCCACCC
AGGCATTCACGCACTACAACATCAACCAGAGCAGATTCCAGCCTCCACATGTACATATGGTCGACCCCAT
CCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAGAACA
GATGGTATCCAGATGCCTTATGGGGACATCCTTCTCCACACAGGCGATTTCACCGAGCTGGGACTGCCCT
CAGAGGTTAAGAAGTTTAATGACTGGTTAGGAAACCTGCCATATGAATATAAAATAGTGATTGCTGGGAA
TCATGAACTGACATTTGATAAGGAATTCATGGCAGACCTTGTTAAACAGGACTACTACCGTTTCCCCTCT
GTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTACTTACAAG
ATTCGGAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAATGGATGGGG
CTTTAACCTACCCAGAGGTCAGTCTCTGCTGGACAAGTGGAACCTCATCCCTGAGGGCATTGACATACTC
ATGACACATGGACCTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGTGG
AGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTTA
TGGCATCATGACCGACGGTTACACAACGTACATCAATGCCTCGACGTGTACAGTCAGCTTTCAACCGACC
AACCCTCCAATTATATTTGACCTTCCAAACCCACAGGGTTCCTGA

Translation (294 aa):
MAHGIPSQGKVTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTHSRT
DGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPS
VSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDIL
MTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPT
NPPIIFDLPNPQGS


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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