CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS79565.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
79565.1 |
Public |
Mus musculus |
17 |
Plin4 |
23 |
108 |
98 |
|
Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 79565.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000190703.6 |
ENSMUSP00000139859.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_020568.3 |
NP_065593.2 |
Updated |
not alive |
|
|
|
NCBI |
NM_020568.4 |
NP_065593.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_065593.2 |
1403 |
O88492-1 |
1403 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 79565.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4212 nt): ATGTCAGCTTCAGGAGATGGGACCAGGGTCCCCCCCAAATCCAAAGGCAAGACCTTGAGCAGTTTCTTTG GGTCCCTGCCTGGCTTCAGCTCTGCCCGGAACCTGGTGTCCCACACTCACAGCTCCACCTCCACAAAGGA CTTACAAACAGCAACAGACCCCTCGGGGACTCCTGCCCCCTCATCTAAAGTGTCCACCAACTCACAGATG GCAGGGGATGCAGCAGGGCTGCTCCAACCTTCTGAACAGACAGCTGGAGACAAGGACATGGGAAGTTTCA GTGTGACCAGCAGTGAAGATGCCTTCTCTGGGGTGTTTGGCATCATGGATGCTGCAAAAGGAATGGTCCA GGGTGGACTGGGTGCTACCCAGTCGGCCCTTGTCGGAACTAAGGAGGCAGTATCTGGAGGTGTGATGGGA GCAGTGGGCGTGGCCAAAGGTCTTGTCAAGGGAGGTCTTGACACTTCAAAGAATGTCCTCACCAATACGA AGGACACAGTTACCACAGGAGTCATGGGAGCTGCAAACATGGCCAAAGGGACAGTACAGACAGGCCTGGA CACCACCAAGTCTGTGGTCATGGGCACTAAGGACACAGTGGCCACAGGACTTGCAGGGGCTGTGAATGTG GCTAAAGGCACCATCCAGGGTGGCCTGGACACCACCAAGTCTGTGGTCATGGGCACTAAGGACACGGTGA CCACAGGACTCACAGGGGCTGTGAACGTGGCTAAAGGTGTTGTCCAGGGTGGCCTGGACACTACCAAGTC TGTGGTCATGGGCACCAAGGACACAGTAACCACAGGACTCACAGGGGCCATGAATGTGGCTAAAGGCACA GCGCAGATGGGTATAGACACCAGCAAGACTGTGCTGACTGGCACAAAGGACACTGTATGTGCTGGGGCCA CAGGAGCCATTAATGTAGCTAAAGGGGCTGCCCAAGGAGGCCTGGACACCACCAAGTCTGTGCTCATAGG CACCAAGGATACGGTGACCACAGGGCTCACAGGGGCTGTGAACGTGGCTAAAGGTGCTGTCCAGGGAGGC CTGGACACTACCAAGTCTGTGGTCATGGGCACCAAGGACACGGTAACCACAGGACTCACTGGGGCCATGA ATGTGGCTAAAGGCACAGCACAGATGGGTCTTGGCACCAGCAAGACTGTGCTGACTGGCACAAAGGACAC TGTATGTGCTGGGCTCACAGGAGCCATTAATGTGGCTAAAGGGGCTGCCCAAGGAGGCCTGGACACCACC AAGTCTGTGCTCATGGGTACAAAGGACACAGTGACCACAGGGCTCACAGGGGCTGTGAACGTGGCTAAAG GTACCATCCAGGGTGGCCTGGACACCACCAAGTCTGTGGTCATGGGCACTAAGGACACGGTGACCACAGG GCTCACAGGGGCTGTGAACGTGGCTAAAGGTACCATCCAGGGTGGCCTGGACACCACCAAGTCTGTGGTC ATGGGCACTAAGGACACGGTGACCACAGGACTCACAGGGGCTGTGAACGTGGCTAAAGGTGCTGCCCAGG GAGGCCTGGACACTACCAAGTCTGTGGTCATGGGCACCAAGGACACAGTAACCACAGGACTCACAGGGGC CATGAATGTGGCTAAAGGCACAGCACAGATGGGTCTTGGCACCAGCAAGACTGTGCTGACTGGCACAAAG GACACTGTATGTGCTGGGCTCACAGGAGCCATTAATGTGGCTAAAGGGGCTGCCCAAGGAGGCCTGGACA CCACCAAGTCTGTGCTCATGGGTACAAAGGACACAGTGACCACAGGGCTCACAGGGGCTGTGAACGTGGC TAAAGGTACCATCCAGGGTGGCCTGGACACCACCAAGTCTGTGGTCATGGGCACTAAGGACACGGTGACC ACAGGACTCACAGGGGCTGTGAACGTGGCTAAAGGTGCTGTCCAGGGTGGCCTGGACACTACCAAGTCTG TGGTCATGGGCACCAAGGACACAGTAACCACAGGACTCACAGGGGCCTTGAATGTGGCTAAAGGCACAGC ACAGATGGGTATAGACACCAGCAAGACTGTGCTGATTGGCACAAAGGACACTGTATGTGCTGGGGCCACA GGAGCCATTAACATGGCTAAAGGGGCTGCCCAAGGAGGCCTGGACACTACCAAGTCCGTGCTCATGGGTA CAAAGGACACGGTGACCACAGGACTCACAGGGGCCATTAACGTGGCTAAAGGGTCTGCCCAAGGAGGCCT GGACACCACCAAGTCTGTGCTCATTGGTACGAAGGACACGGTGACCACAGGGCTCACAGGAGCCTTGAAT GTGGCCAAAGGAACAGTACAGACAGGTCTGGATACTAGCCAGAGAGTGCTGACAGGCACAAAGGACAATG TATATGCTGGGGTCACTGGTGCAGTAAATGTGGCCAAAGGTACCATCCAGGGCGGCTTGGACACCACCAA GTCTGTGGTCATGGGCACTAAGGACACGGTGACCACAGGACTCACAGGGGCTGTGAACGTGGCTAAAGGT GCTGTCCAGGGTGGCCTGGACACTACCAAATCTGTGGTCATGGGCACCAAGGACACAGTAACCACAGGAC TCACAGGGGCCATGAATGTGGCTAAAGGCACAGCACAGATGGGTATAGACACCAGCAAGACTGTGCTGAC TGGCACAAAGGACACTGTATGTGCTGGGCTCACAGGAGCCATTAATGTAGCTAAAGGGGCTACCCAAGGA GGCCTGGACACCACCAAGTCTGTGCTCATGGGTACAAAGGACACGGTGACCACAGGACTCACAGGTGCCA TTAATGTTGCCAAAGGGGCTGCCCAAGGAGGCCTGGATACCACCAAGTCTGTGCTCTTAGGTACCAAGGA CACCGTGACCACGGGGCTCACAGGGGCAGCAAATGTGGCCAAAGAAACAGTGCAAATGGGTCTGGATACC AGCAAGAACATCCTGATGGACACAAAGGACTCTATATGTGCTGGGGCCACAGGAGCCATTACTGTGGTCA AAGGGGCTGCTCAAGGAGGCCTGGATACTTCGAACGCAGCACTCACAGGCACAATGGACACGGCCAAAGG AACAGTGCAAACAAGCCTGGACACCAGCAAGCATATGCTTATAGGCATGAAGGACACTGTCTGTGCTGGG GTTACCAGTGCCATGAACATGGCTAAAGGTATTCATAAGAACACAGACACCACCAGAGACACCCAGTCTT CTGTGCTGGCTCATTCAGGTAATGTAGCCACCAATGCCATCCACACAGGTGTTCACACAGTTCCGAGTTC ACTCTCTGGCTCTCATTCCATCATCTGTCATGAGCCTAGCATTTACAGAGCCACTAACCATGGGGTAGGA CAAGCCATCCTGACTTCTACAGAGTCCCTGTGCTGTGAGACAAGCAGCTTCTCAGACAAATATGGCTTGG GGCATGTCACAGAGCCCAGAGCTGACACCAAAACCCTTGTGTCTGGTATGGCTTCATCTGCCTGCGCAGC TACCAGGTCAGTGGAGGAGTGTGGTCAGCTGGCTGCCACAGGCTTTGCTGCACTTCCTGATGAGTTGAAA GGGCTGGGTGATATCTTTCAGCCCATGACAACTGAGGAACAAGCTCAGCTGGCAGTCTCAGAGTCAGGGC CCCGAGTACTCTCTGCTGACCGGGGAAGCTACTACATCCGTCTGGGTGACCTGGCCCCTAGCTTCCGCCA GCGGGCCTTCGAACATGCCCTGAGCCACATACAGCACAACCAGTTCCAAGCCAGGGCTGCACTAGCCCAG CTCCAGGAGGCCTTCCAGATGACAGACATGACCATGGAGGCTGCATGTGGGAAGCTGTGCAGTGACCAGA GCTTGAACACCATGGTGGAGGCTGTTGGTAGCCATGAGATGCGGGCTTCCGTGGCTCAGGACAGGCTGTG CACCCTCGCCCATCAGCTCCATGCAGCTTACAGCAGCCTAGTAACCAGCCTGCAGGGCCTGCCAGAGGTG CAGCAGCAGGCAGGGCAGGCACGGCACAGCCTCTGCAAGCTGTATGGCCTTGTGTCTTCGGAGGCAGGTA GTGAGCTGCAGACAGAGCAGCTGGCCCAGAGCAGTGCTGGTGTTGTTGAGGCCTGGCAGGGCCTGGAGGT GCTGCTTGAGAAGCTGCAGCAGAACCCTCCACTCAGCTGGCTGGTTGGACCCTTCACCTCGATGCCTTGT GGCCAGCTGTAG
Translation (1403 aa): MSASGDGTRVPPKSKGKTLSSFFGSLPGFSSARNLVSHTHSSTSTKDLQTATDPSGTPAPSSKVSTNSQM AGDAAGLLQPSEQTAGDKDMGSFSVTSSEDAFSGVFGIMDAAKGMVQGGLGATQSALVGTKEAVSGGVMG AVGVAKGLVKGGLDTSKNVLTNTKDTVTTGVMGAANMAKGTVQTGLDTTKSVVMGTKDTVATGLAGAVNV AKGTIQGGLDTTKSVVMGTKDTVTTGLTGAVNVAKGVVQGGLDTTKSVVMGTKDTVTTGLTGAMNVAKGT AQMGIDTSKTVLTGTKDTVCAGATGAINVAKGAAQGGLDTTKSVLIGTKDTVTTGLTGAVNVAKGAVQGG LDTTKSVVMGTKDTVTTGLTGAMNVAKGTAQMGLGTSKTVLTGTKDTVCAGLTGAINVAKGAAQGGLDTT KSVLMGTKDTVTTGLTGAVNVAKGTIQGGLDTTKSVVMGTKDTVTTGLTGAVNVAKGTIQGGLDTTKSVV MGTKDTVTTGLTGAVNVAKGAAQGGLDTTKSVVMGTKDTVTTGLTGAMNVAKGTAQMGLGTSKTVLTGTK DTVCAGLTGAINVAKGAAQGGLDTTKSVLMGTKDTVTTGLTGAVNVAKGTIQGGLDTTKSVVMGTKDTVT TGLTGAVNVAKGAVQGGLDTTKSVVMGTKDTVTTGLTGALNVAKGTAQMGIDTSKTVLIGTKDTVCAGAT GAINMAKGAAQGGLDTTKSVLMGTKDTVTTGLTGAINVAKGSAQGGLDTTKSVLIGTKDTVTTGLTGALN VAKGTVQTGLDTSQRVLTGTKDNVYAGVTGAVNVAKGTIQGGLDTTKSVVMGTKDTVTTGLTGAVNVAKG AVQGGLDTTKSVVMGTKDTVTTGLTGAMNVAKGTAQMGIDTSKTVLTGTKDTVCAGLTGAINVAKGATQG GLDTTKSVLMGTKDTVTTGLTGAINVAKGAAQGGLDTTKSVLLGTKDTVTTGLTGAANVAKETVQMGLDT SKNILMDTKDSICAGATGAITVVKGAAQGGLDTSNAALTGTMDTAKGTVQTSLDTSKHMLIGMKDTVCAG VTSAMNMAKGIHKNTDTTRDTQSSVLAHSGNVATNAIHTGVHTVPSSLSGSHSIICHEPSIYRATNHGVG QAILTSTESLCCETSSFSDKYGLGHVTEPRADTKTLVSGMASSACAATRSVEECGQLAATGFAALPDELK GLGDIFQPMTTEEQAQLAVSESGPRVLSADRGSYYIRLGDLAPSFRQRAFEHALSHIQHNQFQARAALAQ LQEAFQMTDMTMEAACGKLCSDQSLNTMVEAVGSHEMRASVAQDRLCTLAHQLHAAYSSLVTSLQGLPEV QQQAGQARHSLCKLYGLVSSEAGSELQTEQLAQSSAGVVEAWQGLEVLLEKLQQNPPLSWLVGPFTSMPC GQL
|