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Report for CCDS79857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79857.1 Public Mus musculus 2 Nnat 23 108 98 CCDS HistoryNCBI Gene:18111Re-query CCDS DB by CCDS ID:79857.1Re-query CCDS DB by GeneID:18111See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79857.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173839.1 ENSMUSP00000133394.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173839.1Link to Ensembl Protein Viewer:ENSMUSP00000133394.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000173839Re-query CCDS DB by Protein ID:ENSMUSP00000133394
Original member Current member NCBI NM_001291130.1 NP_001278059.1 Accepted alive Link to Nucleotide Sequence:NM_001291130.1Link to Protein Sequence:NP_001278059.1Re-query CCDS DB by Nucleotide ID:NM_001291130Re-query CCDS DB by Protein ID:NP_001278059Link to BLAST:NP_001278059.1

Chromosomal Locations for CCDS 79857.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 157560189 157560260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 157561213 157561239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 157561542 157561634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (192 nt):
ATGGCCGCAGTGGCAGCAGCCTCGGCAGAACTGCTCATCATCGGCTGGTACATCTTCCGCGTGCTGCTGC
AGGTGTTCCTGGAATGCTGCATTTACTGGGTGTTCAGGTACTCCCTGCAGAAGCTGGCGCACACGGTGTC
CCGGACCGGGCGGCAGGTGCTGGGGGAGCGCAGGCAGCGAGCCCCCAACTGA

Translation (63 aa):
MAAVAAASAELLIIGWYIFRVLLQVFLECCIYWVFRYSLQKLAHTVSRTGRQVLGERRQRAPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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