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Report for CCDS80203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80203.1 Public Mus musculus 5 Cdk14 23 108 98 CCDS HistoryNCBI Gene:18647Re-query CCDS DB by CCDS ID:80203.1Re-query CCDS DB by GeneID:18647See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115450.7 ENSMUSP00000111110.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115450.7Link to Ensembl Protein Viewer:ENSMUSP00000111110.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115450Re-query CCDS DB by Protein ID:ENSMUSP00000111110
Original member Current member EBI ENSMUST00000115451.7 ENSMUSP00000111111.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115451.7Link to Ensembl Protein Viewer:ENSMUSP00000111111.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115451Re-query CCDS DB by Protein ID:ENSMUSP00000111111
Original member NCBI NM_001310448.1 NP_001297377.1 Updated not alive Link to Nucleotide Sequence:NM_001310448.1Link to Protein Sequence:NP_001297377.1Re-query CCDS DB by Nucleotide ID:NM_001310448Re-query CCDS DB by Protein ID:NP_001297377
Current member NCBI NM_001310448.2 NP_001297377.1 Accepted alive Link to Nucleotide Sequence:NM_001310448.2Link to Protein Sequence:NP_001297377.1Re-query CCDS DB by Nucleotide ID:NM_001310448Re-query CCDS DB by Protein ID:NP_001297377Link to BLAST:NP_001297377.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297377.1 423 O35495-2 423 100% 0 0

Chromosomal Locations for CCDS 80203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 4888865 4888980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4894028 4894167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4922127 4922175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4949532 4949595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5010833 5010926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5036426 5036546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5092958 5093081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5103792 5103854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5135319 5135413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5195278 5195357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5227164 5227258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 5248983 5249213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGTCTACCCGGAACTGCCAGGGGACAGATTCAGTGATCAAGCACCTGGACACAATTCCTGAAGACAAGA
AAGTCAGGGTTCAGAGGACGCAGAGCACTTTTGACCCATTTGAGAAACCAGCCAACCAAGTCAAAAGGGT
CCATTCTGAGAACAATGCATGCATTAACTTTAAATCCTCCTCTGCTGGCAAAGAGTCACCTAAAGTTCGG
CGGCACTCCAGCCCCAGCTCGCCAACGAGTCCCAAATTTGGAAAAGCTGACTCATACGAAAAACTGGAAA
AACTGGGGGAAGGATCTTATGCAACAGTGTACAAAGGGAAAAGCAAAGTGAATGGGAAGCTGGTGGCTCT
AAAGGTGATCCGGCTGCAGGAAGAAGAGGGCACACCTTTCACAGCCATCAGGGAAGCTTCCCTGTTGAAA
GGACTAAAGCACGCCAACATCGTGTTGCTTCACGACATCATCCACACTAAGGAAACCCTGACCCTTGTCT
TTGAATACGTGCACACTGATTTATGTCAGTACATGGACAAGCACCCTGGAGGACTCCATCCAGATAATGT
GAAGTTGTTTTTATTTCAGCTGCTGCGAGGACTGTCTTACATCCACCAGCGTTATATTTTGCACAGAGAC
CTGAAACCGCAGAACCTTCTCATCAGCGATACGGGGGAGTTGAAGCTGGCAGATTTCGGTCTGGCAAGAG
CAAAATCCGTCCCTAGCCACACATACTCCAATGAAGTGGTTACCTTGTGGTACAGACCTCCAGATGTTCT
TCTGGGCTCTACAGAATATTCCACCTGCCTTGACATGTGGGGAGTTGGCTGTATCTTCGTTGAGATGATC
CAAGGAGTTGCTGCGTTTCCAGGAATGAAAGACATTCAGGATCAACTTGAACGGATATTTCTGGTTCTTG
GAACACCGAATGAGGACACGTGGCCTGGAGTTCATTCTTTACCACATTTTAAGCCAGAACGCTTTACCGT
GTACAGCTCTAAAAGCCTTAGACAAGCATGGAATAAGCTCAGCTATGTAAATCATGCTGAAGACTTGGCC
TCCAAGCTTCTCCAGTGTTCCCCAAAGAACAGGCTATCAGCACAGGCCGCCTTGAGCCATGAGTATTTCA
GCGATCTGCCTCCACGGCTATGGGAGCTGACTGATATGTCTTCTATTTTTACCGTCCCAAATGTGAGATT
GCAACCAGAAGCTGGAGAGAGCATGAGGGCCTTTGGAAAAAACAATAGTTATGGGAAAAGCCTATCGAAC
AGCAAACACTGA

Translation (423 aa):
MSTRNCQGTDSVIKHLDTIPEDKKVRVQRTQSTFDPFEKPANQVKRVHSENNACINFKSSSAGKESPKVR
RHSSPSSPTSPKFGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLK
GLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRD
LKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI
QGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTVYSSKSLRQAWNKLSYVNHAEDLA
SKLLQCSPKNRLSAQAALSHEYFSDLPPRLWELTDMSSIFTVPNVRLQPEAGESMRAFGKNNSYGKSLSN
SKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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