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Report for CCDS80709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80709.1 Public Mus musculus 7 Zfp936 23 108 98 CCDS HistoryNCBI Gene:668620Re-query CCDS DB by CCDS ID:80709.1Re-query CCDS DB by GeneID:668620See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80709.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202535.3 ENSMUSP00000143800.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202535.3Link to Ensembl Protein Viewer:ENSMUSP00000143800.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202535Re-query CCDS DB by Protein ID:ENSMUSP00000143800
Original member Current member NCBI NM_001034893.2 NP_001030065.1 Accepted alive Link to Nucleotide Sequence:NM_001034893.2Link to Protein Sequence:NP_001030065.1Re-query CCDS DB by Nucleotide ID:NM_001034893Re-query CCDS DB by Protein ID:NP_001030065Link to BLAST:NP_001030065.1

Chromosomal Locations for CCDS 80709.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43177701 43177703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43187170 43187296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43187493 43187553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43189302 43190481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGGATGCATTGACCTTTGATGATGTGCATGTACACTTCACTCGGGAGGAGTGGTCCTTGCTGGATCCAT
CTCAGAAGAGACTTTACAAAGATGTCATGCTGGAGAACTACAGGAATCTCACCGCTATAGGCTACAATTG
GAAAGACCATAACATTGAAGAACATTGTCAAAATGATAGAAGATATGGAAGGCACAAAATCACTCCTGCT
GGAGAGAAACCCTATGAATATACACAATGGGATAAAGCCTTCAAATATCACAGTCATCTTCAAAAGCTTG
AAAGAAACCAAACTGGAGACAAAAACTCTGAAGTCTTTCAACATAGTAAAGTGCTTGCATGTCAAAGTAC
TCTACAAAGAAATAAAAGAACAAATACTGGAGAGAAACCCTACAAACCCAGCTATCTTCGAATGCATGAA
AGAACACATACTGGAGAGAAACCTTACCAATGTAATGAATGTGATAAAGCCTTTTTACAGCTCAGGTATC
TTAGATTACATGAAAGAAGACATAGTGGAGAGAAACCCTATGAATGTAATCAATGTGGTAAAGCCTTTTT
ACATCTCAACTATCTTAGAATTCATGAAAGAACACATACTGGAGAGAAACCTTACCAATGTAATCAATGT
GGTAAAGCCTTTACACAAAGGAGTCATCTTCAAAGACATAAAGTAGTACATACTGGAGTGAGACCCTACA
TATGTAATCAGTGTAATAAAGCCTACCCACAGCAGAATTATCTCCGAAAACATGAAAGAACACATACTGG
AGAGAAACCTTATATATGTAACCAGTGTAATAAAGCCTTTTCACACCAGAGTAATCTCCGAATACATGAA
AAGACACATACAGGTGAGAAACCCTATAAATGTAATCAGTGTGATAAAGCCTTTTCACACCAGAGTAATC
TCCAAATACATGAAAGAACACATACAGGTGAGAAACCCTATAAATGTAATCAGTGTGATAAAGCCTTTGC
ACACCTCAAGTATCTTCGAGCACATGAAAGAACACATACTCAAGAGAAACCATACAAATGTAATCAATGT
GGTAAAGCTTTTTTATATCTCAGCTGTCTTCGGGTACATGAAAGAACACATACTGGAGAGAAACCTTATA
AATGTAATCAGTGTGATAAAGCCTTTGCACACCTCAAGTATCTTCGAGCACATGAAAGAATACATACTCA
AGAGAAACCCTACAAATGTAATCAATGTGGTAAAGCCTTTTTACTTCTCAGCTGTCTTCGGGTACATGAA
AGAACACATACTGGAGAGAAACCTTACAAATGTGATCAATGTGGTAAGGCTTTTACACAACGCAGTCATC
TTAAAACCCATAAAGTAATACATACTGGAGGGAGACTCTAA

Translation (456 aa):
MDALTFDDVHVHFTREEWSLLDPSQKRLYKDVMLENYRNLTAIGYNWKDHNIEEHCQNDRRYGRHKITPA
GEKPYEYTQWDKAFKYHSHLQKLERNQTGDKNSEVFQHSKVLACQSTLQRNKRTNTGEKPYKPSYLRMHE
RTHTGEKPYQCNECDKAFLQLRYLRLHERRHSGEKPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQC
GKAFTQRSHLQRHKVVHTGVRPYICNQCNKAYPQQNYLRKHERTHTGEKPYICNQCNKAFSHQSNLRIHE
KTHTGEKPYKCNQCDKAFSHQSNLQIHERTHTGEKPYKCNQCDKAFAHLKYLRAHERTHTQEKPYKCNQC
GKAFLYLSCLRVHERTHTGEKPYKCNQCDKAFAHLKYLRAHERIHTQEKPYKCNQCGKAFLLLSCLRVHE
RTHTGEKPYKCDQCGKAFTQRSHLKTHKVIHTGGRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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