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Report for CCDS81153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81153.1 Public Mus musculus X Zc4h2 23 108 98 CCDS HistoryNCBI Gene:245522Re-query CCDS DB by CCDS ID:81153.1Re-query CCDS DB by GeneID:245522See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81153.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119640.7 ENSMUSP00000113689.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119640.7Link to Ensembl Protein Viewer:ENSMUSP00000113689.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119640Re-query CCDS DB by Protein ID:ENSMUSP00000113689
Original member Current member NCBI NM_001289697.1 NP_001276626.1 Accepted alive Link to Nucleotide Sequence:NM_001289697.1Link to Protein Sequence:NP_001276626.1Re-query CCDS DB by Nucleotide ID:NM_001289697Re-query CCDS DB by Protein ID:NP_001276626Link to BLAST:NP_001276626.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276626.1 217 Q68FG0-2 217 100% 0 0

Chromosomal Locations for CCDS 81153.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 95640538 95640651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 95642164 95642326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 95643308 95643459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 95645307 95645478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 95658252 95658304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGCAGATGAACAAGAAATCATGTGCAAATTGGAAAGCATTAAAGAGATCAGGAACAAGACTCTGCAGA
TGGAAAAGATCAAGGCCCGTTTGAAGGCTGAGTTCGAGGCTCTGGAGTCTGAAGAGAGGCACCTGAAAGA
ATACAAACAGGAGATGGATCTCCTGCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCGACTCATCCAT
GCTGATATCAATGTGTCTGAAAATGACTTAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATGATGAGT
ATAAACCACTGAAAGAACACGTGGATGCCCTGCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCTGTG
TGAAGAGGAAGAGAAACTCTCCTTGGATTACTTTGAGAAGCAGAAAGCAGAATGGCAGACTGAACCTCAA
GAACCCCCCATACCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGCCAGGAAGC
AGGACACAAGGCAGACAGCCACCTTCAGGCAGCAGCCTCCACCTATGAAGGCCTGTTTGTCATGTCACCA
ACAGATTCATCGAAATGCACCTATATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGAACCCCAAAAAG
CCAAAACGGAAGCAAGATGAATGA

Translation (217 aa):
MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAEFEALESEERHLKEYKQEMDLLLQEKMAHVEELRLIH
ADINVSENDLNKLLESTRRLHDEYKPLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQ
EPPIPESLAAAAAAAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKK
PKRKQDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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