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Report for CCDS8126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8126.1 Public Homo sapiens 11 CST6 24 110 108 CCDS HistoryNCBI Gene:1474Re-query CCDS DB by CCDS ID:8126.1Re-query CCDS DB by GeneID:1474See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8126.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312134.3 ENSP00000311313.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312134.3Link to Ensembl Protein Viewer:ENSP00000311313.2Re-query CCDS DB by Nucleotide ID:ENST00000312134Re-query CCDS DB by Protein ID:ENSP00000311313
Original member Current member NCBI NM_001323.4 NP_001314.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001323.4Link to Protein Sequence:NP_001314.1Re-query CCDS DB by Nucleotide ID:NM_001323Re-query CCDS DB by Protein ID:NP_001314Link to BLAST:NP_001314.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001314.1 149 Q15828 149 100% 0 0

Chromosomal Locations for CCDS 8126.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66012045 66012284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66012826 66012951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66013317 66013400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (450 nt):
ATGGCGCGTTCGAACCTCCCGCTGGCGCTGGGCCTGGCCCTGGTCGCATTCTGCCTCCTGGCGCTGCCAC
GCGACGCCCGGGCCCGGCCGCAGGAGCGCATGGTCGGAGAACTCCGGGACCTGTCGCCCGACGACCCGCA
GGTGCAGAAGGCGGCGCAGGCGGCCGTGGCCAGCTACAACATGGGCAGCAACAGCATCTACTACTTCCGA
GACACGCACATCATCAAGGCGCAGAGCCAGCTGGTGGCCGGCATCAAGTACTTCCTGACGATGGAGATGG
GGAGCACAGACTGCCGCAAGACCAGGGTCACTGGAGACCACGTCGACCTCACCACTTGCCCCCTGGCAGC
AGGGGCGCAGCAGGAGAAGCTGCGCTGTGACTTTGAGGTCCTTGTGGTTCCCTGGCAGAACTCCTCTCAG
CTCCTAAAGCACAACTGTGTGCAGATGTGA

Translation (149 aa):
MARSNLPLALGLALVAFCLLALPRDARARPQERMVGELRDLSPDDPQVQKAAQAAVASYNMGSNSIYYFR
DTHIIKAQSQLVAGIKYFLTMEMGSTDCRKTRVTGDHVDLTTCPLAAGAQQEKLRCDFEVLVVPWQNSSQ
LLKHNCVQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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